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54-3094-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 17954976 [Map]; Strand: c
      • AT4G38340.1 - [+] show detail - Plant regulator RWP-RK family protein
        Distance: 0; Region: intron1 (CDS)
    Flanking Genome Sequence: 54-3094-1 - 5-prime edge 
    CCCACAAGGT CAAACCCCAT AGCTTGTTTT TTTTTATAAA TGTTTGATGG 
    ATGGATTTGG AGCCGACCTC ATCTGAATCT TACTAATCCA TTACATATAT 
    CGGCCAGTTA CAAATATTAT ATATCAAAGA TAACAAGAAC AATATATACA 
    CACAAAAAAA TGTAAAAGAC AGAGAGAATA TGTAATGTGT AGAGAGAGAG 
    AGAGATGAAG CAAGTAAGAG AGGATGATCC TTGTTTGTTT TCTTGAANAA 
    TCATCAACAA CTGGATC

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 17955048 [Map]; Strand: c
      • AT4G38340.1 - [+] show detail - Plant regulator RWP-RK family protein
        Distance: 0; Region: intron1 (CDS)
    Flanking Genome Sequence: 54-3094-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCTA 
    GGCAATTGGG TTTTTATTTT AGCTGCTGAC TTATCCCATT TTGGCAGCTC 
    TTCTGTTTGA CATAATATAA TAAAAAGGGA GGGAGTCGTT GGCGTTTGAT 
    ATTGAACAAC CAAGGAAGGA GAGCCTATCA AACCACATGC NTTGCATCAT 
    CTCTTTTAGC CAACTCTGCC TCATAATTAC TTTCTATAGG AGGCCAAGCT

AT4G38340.1

Model type
Protein coding
Short Description
Plant regulator RWP-RK family protein
Computational Description
Plant regulator RWP-RK family protein; CONTAINS InterPro DOMAIN/s: Octicosapeptide/Phox/Bem1p (InterPro:IPR000270), Plant regulator RWP-RK (InterPro:IPR003035), GAF (InterPro:IPR003018); BEST Arabidopsis thaliana protein match is: Plant regulator RWP-RK family protein (TAIR:AT1G76350.1); Has 720 Blast hits to 573 proteins in 47 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 7; Plants - 646; Viruses - 0; Other Eukaryotes - 63 (source: NCBI BLink).
Link
InterPro Scan - TAIR