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54-3256-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 8473660 [Map]; Strand: w
      • AT2G19580.1 - [+] show detail - tetraspanin2
        Distance: 0; Region: intron2 (CDS)
      • AT2G19582.1 - [+] show detail - other RNA
        Distance: -786; Region: promoter
    Flanking Genome Sequence: 54-3256-1 - 3-prime edge 
    GACCAAAGGA AGTAAGGCAA GTAGCTGGTA AATAGTTTTG TTATATTTGA 
    ATAAAATTTT GGTATTGTGC TATCCAAATT ATAACTTAGT TGTGTGGGCG 
    ATATGATCAT CTACTTTTCT AATCTTTATT TGAATCAGAA TTTCCGATTA 
    TTCGTCATCA AATAAATTTT GACGTAGATT TGTGTTCTGT ATTATGCAAA 
    CGTCATTTAA ATCATTTTAT TCCTAAAATT TCTATAGCAA GTTGTCATCC 
    TAGTCCATTG TCACTGTAAC AAGATTGGAA CCACTAATAA TTAAATAAGC 
    CTAGATGGTG AGGTCTCGAC TGAATTTTTA ATCTTTTAGT CATTAGACAT 
    TATTAAATAT TGGACCAATG ATTTGATTCA ATAATTACGA TCACAAGTCT 
    TTGTCTCCAT CATGAAACAT AATAGATAAT TATATCCCTC CCATGTTGGC 
    ATGTTGCCCC ACTCACATTA TAATTTTTCT TATATGGATA ATTAAGAAGC 
    AAGATAAATT AAGTTTATTT CTAAGAAAGA ACTATACAAT TTCTCGTCCT 
    CGAGACAGAA CCAAACTTTA CTCATAAGTA AAAGAAGATT AAGTCTCTCC 
    TTATGTACTT TCATACCAAG CAAGCAATTT TTTANGTTTC TTATAGTCGT 
    TTTATGGCTT TTAGACTAAA ACTAGTACTG TTTCATTGNT TTANGTCTTG 
    AACTCTTGAT TGGTTGGGGT TTGCCCTT

AT2G19580.1

Model type
Protein coding
Short Description
tetraspanin2
Curator Summary
Member of TETRASPANIN family
Computational Description
tetraspanin2 (TET2); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: aging; LOCATED IN: endomembrane system, integral to membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tetraspanin (InterPro:IPR018499), Tetraspanin, subgroup (InterPro:IPR000301); BEST Arabidopsis thaliana protein match is: Tetraspanin family protein (TAIR:AT5G46700.1); Has 515 Blast hits to 513 proteins in 42 species: Archae - 0; Bacteria - 0; Metazoa - 84; Fungi - 0; Plants - 420; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G19582.1

Model type
Other RNA
Short Description
other RNA
Curator Summary
Potential natural antisense gene, locus overlaps with AT2G19580
Link
InterPro Scan - TAIR