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Mutant Lines
54-3302-1

54-3302-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 5; Position: 24739402 [Map]; Strand: w
- AT5G61510.1 - [+] show detail - GroES-like zinc-binding alcohol dehydrogenase family protein
  Distance: -404; Region: promoter
- AT5G61520.1 - [+] show detail - Major facilitator superfamily protein
  Distance: 0; Region: exon3 (CDS)
- AT5G61520.2 - [+] show detail - Major facilitator superfamily protein
  Distance: 0; Region: exon2 (CDS)

CATGAGGTGC TGGTTTTTTT ATTGTTTTCA ATGGCTAAGA ATGGTGGTTT 
CTTGGATATC ACGCTTGCTC GTCATTCTCC TCCAAAACCA ATGCTTCTCC 
CAAAGTCCAA CCACCTTCTC GATTGGAACA TTCTTAGTCT CCGGCAAAAA 
CAGCTGCACC GCTACCGTCA TTACCACCAA CCACCCTCCA TAAAAGAAGA 
AAATCCCAGC TCGAAACTTA CACAACATCG GTGGTGCACT TTGAGCCACC 
GCAAAAGTAA ACACAAAACT CACTGCCACA GTTACACTCT GCGCCACCGA 
TCTTATCTCC AACGGAAAAA TCTCACTCGG TACAAGCCAT CCTAATGGAC 
CCCAAGACCA ACCAAACCCG GCCACGTAGA CACACACCAA AACCACAACC 
GCGTAACCAT ACCCTTCCTT GATCACACCG TCGTGAACAT CAGCCACCAT 
AACGATCACA CCAATGGTAA CTTGCGACAC GAGCATCTGT AACCCTCCAA 
TCAAAAACAG AGTCTTTCTA CCGATTCTGT CAACGACAAG CATCGACAAC 
AACGTCGACG AGGTTCCCAC GATTCCAGTC ACGAGGGTCG ACATCAACGA 
ACCACTCTCT CCAAACCCAA CGGTTCTATA CAAAACCGGT GCGTAGAAAG 
CAACAACATT GATTCCAGTA ACTTGCTGAA AGAAAGGTAT CACCAAAGCC 
ATN

3 prime edge [+] show sequence

Chromosome: 5; Position: 24739337 [Map]; Strand: w
- AT5G61510.1 - [+] show detail - GroES-like zinc-binding alcohol dehydrogenase family protein
  Distance: -339; Region: promoter
- AT5G61520.1 - [+] show detail - Major facilitator superfamily protein
  Distance: 0; Region: exon3 (3UTR)

ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCC 
GTCCTCATGA TTTGAGATGA GACGCATCTT TTGTTGCCAA AAAAATTATT 
GCATATAAGT TTTAAAATTT TCAAAGTTCA AACTAAATTA AGGATATTTT 
TTTACTATTC ACGTAACAAT AATCAAATCA CATGATCCAA GATTCGATTA 
TTGTTCAAAT TATTTTGTAA ATTTAGCCAT AGTTTCATTT TTTCACTTAT 
ATGTTTGTGA AATAACGATT TGTGTTTGGA ATTAAAATTA GGGGTGTTTT 
ATAAATATAG TAAAACTAGG ATAGTGATAA TGTAATATAT TGAACGTTAA 
AGGACAAAGA TGGGAAATAG AAAATAAAGT TAGGAGGCAG AGAAGAAATG 
GGGGCCATAA GAAAATGGCA GCATTGACTC TTCATCATCA TCATCATCAT 
CGTCATCACT CGTGTCTTCA AGCGTCTGGA CATCTGTCAC GTCGTCTATA 
TCACCGAATA TTCTCGAGCT TTCCACGAAA TCCCGTCAAA GATCTCAACT 
TTCGTCTAAG TCTTGCCGAT TTCTCGAGTT TTTCTTTATC TACACGTGGC 
ACTGTGTTTG CTGTAAGAGC TCTGAGTACA GTCGCGGTAG AAGAGTCGTC 
CGAGAAGAAG ATGGTGAAAG GGATTAGGGT TTATGAGCAT GGCGGTCCTG 
AGGTGAGTAA AAGATTCGAT TTTGAAGTTC CGGGTCGGAT TTGGATCATT 
GAATCAAATT AGATTGCGAT TGTGTCTGN

AT5G61510.1

Model type: Protein coding
Short Description: GroES-like zinc-binding alcohol dehydrogenase family protein
Computational Description: GroES-like zinc-binding alcohol dehydrogenase family protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity, zinc ion binding; INVOLVED IN: cell differentiation, response to high light intensity; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: GroES-like (InterPro:IPR011032), NAD(P)-binding domain (InterPro:IPR016040), Alcohol dehydrogenase GroES-like (InterPro:IPR013154), Alcohol dehydrogenase, C-terminal (InterPro:IPR013149), Alcohol dehydrogenase superfamily, zinc-containing (InterPro:IPR002085); BEST Arabidopsis thaliana protein match is: oxidoreductase, zinc-binding dehydrogenase family protein (TAIR:AT4G21580.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT5G61520.1

Model type: Protein coding
Short Description: Major facilitator superfamily protein
Computational Description: Major facilitator superfamily protein; FUNCTIONS IN: carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity; INVOLVED IN: transport, transmembrane transport; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Sugar transporter, conserved site (InterPro:IPR005829), Major facilitator superfamily (InterPro:IPR020846), General substrate transporter (InterPro:IPR005828), Sugar/inositol transporter (InterPro:IPR003663), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT1G34580.1); Has 24946 Blast hits to 24488 proteins in 1831 species: Archae - 380; Bacteria - 10823; Metazoa - 3430; Fungi - 6555; Plants - 2609; Viruses - 0; Other Eukaryotes - 1149 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT5G61520.2

Model type: Protein coding
Short Description: Major facilitator superfamily protein
Computational Description: Major facilitator superfamily protein; FUNCTIONS IN: carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity; INVOLVED IN: transport, transmembrane transport; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Sugar transporter, conserved site (InterPro:IPR005829), Major facilitator superfamily (InterPro:IPR020846), General substrate transporter (InterPro:IPR005828), Sugar/inositol transporter (InterPro:IPR003663), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT1G34580.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR