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54-3377-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 30214651 [Map]; Strand: w
      • AT1G80370.1 - [+] show detail - Cyclin A2;4
        Distance: 0; Region: exon2 (5UTR)
    Flanking Genome Sequence: 54-3377-1 - 5-prime edge 
    TTCATGCCAT TGATCTTCGA TTTCTCATGA CTTCAAATTC ACAGATCGAG 
    AGTTAATGTG GTGCTAAGTC CCAAACGTTA GAAAAGGGTT GGATCGTGTC 
    AAAGGGTTTC AATCATGGGG AAGGAGAATG CNTGTTTCTG GAAACTCTAT 
    ACCAATCCAT GGTCGCCCTG TAACTCGTGC TCTTGCCTCT GCTCTGCGTG 
    CTTCTTCTAA GCTGATAACA TCTTCTGAAG TGGCTGCTAC AACACAGAAC 
    CAGGGACGGG TTCTTAGAGC AAAGAGTAAA AGAACAGCCT TGGATGAGAA 
    GAAAGCCAAT GCACCTAAGA AGCGAGCTGT TCTTAAGGAT ATCACTAATG 
    TTACCTGCGA GAATT

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 30214535 [Map]; Strand: w
      • AT1G80370.1 - [+] show detail - Cyclin A2;4
        Distance: 0; Region: intron1 (5UTR)
    Flanking Genome Sequence: 54-3377-1 - 3-prime edge 
    GGCATGAAGA TTAAACAAAA CAGAGAGATA TATATTTATC TATGCAGAGT 
    CCAATGCATA TAAGATGTTT GGAGAAATTG TTTATTCTAA ACGAGGATTG 
    TTTATCTGAT CATTCATGAC TAGACAAATA ATTGCAAAAC GTACNTTGTT 
    GTTTAAGTTC GTCGAATCAA GTTCCAAAGT TTCAAGTCAG ATTCAAGTTG 
    AAAGAACAAG TCTTTGTGAA TTACAATTTA CTTGTTGACA AAAACTTGAA 
    AACTGTAATG CAGAAAACCC TCAACGCTCG AAAGAAAAAG TCTTAGCAAT 
    TTTAGCAAAG ACGGGAGCGA CTTGCGCAGA ATTTGGAGAT AATTAAATTT 
    GAAGAAAAAA TTAGTAAAGT TTCTAAATTT CTTTCATGGG TTTTTATATA 
    TAAATGTTTA TCCATAAGAA ATAGGAACAA GAAAAGGAAC GACTAGATCA 
    AATTTCTTCT GAGGATAACG AAAAGACCCA TGATTTAAAG CTGCAAGATC 
    TCCCAAAAAA ACCTATCGAT CCCGTTCGTT AAAAAAAAAA GTAATCAAAG 
    TCACATTTTN TTTAATCCAA GAAAAATCCG AGNGACCCAT GAACCAAAAA 
    AGCT

AT1G80370.1

Model type
Protein coding
Short Description
Cyclin A2;4
Computational Description
Cyclin A2;4 (CYCA2;4); CONTAINS InterPro DOMAIN/s: Cyclin, C-terminal (InterPro:IPR004367), Cyclin (InterPro:IPR006670), G2/mitotic-specific cyclin A (InterPro:IPR015453), Cyclin-like (InterPro:IPR011028), Cyclin-related (InterPro:IPR013763), Cyclin, N-terminal (InterPro:IPR006671), Cyclin, A/B/D/E (InterPro:IPR014400); BEST Arabidopsis thaliana protein match is: CYCLIN A2;3 (TAIR:AT1G15570.1); Has 4103 Blast hits to 4099 proteins in 369 species: Archae - 0; Bacteria - 2; Metazoa - 1911; Fungi - 542; Plants - 1008; Viruses - 34; Other Eukaryotes - 606 (source: NCBI BLink).
Link
InterPro Scan - TAIR