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54-3437-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 347401 [Map]; Strand: c
      • AT2G01810.1 - [+] show detail - RING/FYVE/PHD zinc finger superfamily protein
        Distance: -136; Region: promoter
    Flanking Genome Sequence: 54-3437-1 - 5-prime edge 
    GNGAAAAACT AACAAAATCC GGTTATACGA TAACGGTCGG TACGGGATTT 
    TCCCATCCTA CTTTCATCTC TTAAAAGTAA GAGTGGAATT TCCGGTTTAC 
    TTGGTTTTGG TTTGGGATAA CGTGAGATTG GCCTGATTTG ATTGTGACGG 
    GACTCATCTT CTTCCGTGTG GTTTGTTTAT TAACGATTTT TGCCCTTTCG 
    GCGGCGATTT TGGTTCATTG GTTTTGTTAT TTTATTGCAA GAGTGGGAGT 
    TCCGGTTAAA GAGGGTTTGG TTCGGTTTAA TTTGGTTTGT GACCACGTGA 
    CATTGGCTGA TTGTTGCGAC ATGTCTTTCG TGTGGGTTTG CGTGGATTGA 
    CGATTTTGCT CAATGTGATT TCTGAATATG TGTTCGTGTT GGCCATATGG 
    TGTATTCATG AAAATAACTT TATAGAAGGT TAAATAGTAT TAGATTTAGG 
    ATATATGTCA ATCTTCTGTT TCTCTATATT TACTCCGATA CGTTGTTATC 
    TCCTATGAGG CAACTGCTGT TGTATAAATA CCTCTCAAAT TCTCAAATTC 
    TACTCCGATA CTAAAAACTT GAATAGTAAT CGTTTTCGTA TATGGGAGTA 
    ACAAATCAAG GGAAACCAAA GAGAAGCTAA TGTTGGATAA TGGAGAAAAT 
    CAAATCATTA TCTTCTGTTC TGTCTGCTCA CATAAAGATA AACAATGTGA 
    AATCTATTTC GTTGTCCGCG CATAATATCG GGAAGGTTTA NAATGTTATA 
    TCATTAGTAA ATTCC

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 347410 [Map]; Strand: c
      • AT2G01810.1 - [+] show detail - RING/FYVE/PHD zinc finger superfamily protein
        Distance: -127; Region: promoter
    Flanking Genome Sequence: 54-3437-1 - 3-prime edge 
    ATGAAACGGT AGAGGTATTT TACCGACCGT TACCGACCGT TTTCATCCCA 
    ACAAACCAAA AAACACGATC GCCGCCACAA GGGCAAAACC GTCAATTCAC 
    AAGTAGATCC TGTCACGTGA TCCCAATGAT AAAACCAATC CTCTCTCTCT 
    CTCTCTTTTC CCGTAGTCCT TTTTCAGTCA TGGCGATAAC CGCATACGAC 
    GCTCTCACGG AGAGACAAAA AGCCCCCAAA GTCCTCCTTA TTAACGATTT 
    TGCCATCTCT TCTTCTTCAT CATCACCACC TTTCTTCAAC CTCGCCGCAA 
    CTTTCCGCGA CAACATCAGA TCGTTCCTCC GTGAATATGC CGAGATTGAA 
    GATTACACCA TCGACGGAGC CACCGTCTCT ACTATTTTCC TTGGAAGCCA 
    AGCAAATGGC GTCGTTTTCC CTCTTTACAT CATCGAACAA CAAATCTCTG 
    ATTCTTCTCC AAACCCTCTC TGNGATTTCT GTCGATGCTT TGGTAAATAA 
    TAAATCTTAN GGTNTGTTTT TTCGGTGNTC TTGGGAAAGT TTCGATTTTG 
    GATCGTTTAC GTGTGTGTAT ATATATAGGG GGGGGGTCAT CACTNTGTAA 
    CGAAGAGGAA GTTTTATNTG ATATNCCCAA CCGGGATGAA TGGAATGAGC 
    CNTTGANANA AAAGCTCCAN CCNGGCCGTA GACCCGNNNN CCNTNTNA

AT2G01810.1

Model type
Protein coding
Short Description
RING/FYVE/PHD zinc finger superfamily protein
Computational Description
RING/FYVE/PHD zinc finger superfamily protein; FUNCTIONS IN: DNA binding, zinc ion binding; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: cellular_component unknown; EXPRESSED IN: sperm cell, male gametophyte, flower, pollen tube; EXPRESSED DURING: M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: RING/FYVE/PHD zinc finger superfamily protein (TAIR:AT1G66170.1); Has 637 Blast hits to 622 proteins in 140 species: Archae - 0; Bacteria - 0; Metazoa - 159; Fungi - 216; Plants - 250; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink).
Link
InterPro Scan - TAIR