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54-3465-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 15702687 [Map]; Strand: w
      • AT4G32540.1 - [+] show detail - Flavin-binding monooxygenase family protein
        Distance: 0; Region: exon4 (CDS)
    Flanking Genome Sequence: 54-3465-1 - 5-prime edge 
    ATCAACGGCC TTTTCTATGA TTATTAGGGA GGTGATTTTT TCACGGACGA 
    TGGGATGCCG AAAACGCCGT TTCCTAACGG CTGGAGAGGA GGGAAAGGAT 
    TGTACACAGT TGGTTTTACG AGAAGAGGAC TCCTTGGAAC GGCGTCTGAC 
    GCCGTTAAGA TCGCTGGCGA AATTGGTGAC CAGTGGAGAG ACGAAATCAA 
    GGGGTCCACT AGGAATATGT GCAGTTCTCG TTTTGTCTTT ACCTCTAAAT 
    CCTAATTTGC GTTTTTCACT TCTTTTTTTG TTTGTTTAAA GTTACCACCT 
    AATTTTGCTT GTTGTAAATC GAAGTAATAA ACTTGTACAG ATTTTCCTTA 
    GGCAGATTAG AAGATTGAGA AAGCT

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 15702571 [Map]; Strand: w
      • AT4G32540.1 - [+] show detail - Flavin-binding monooxygenase family protein
        Distance: 0; Region: intron3 (CDS)
    Flanking Genome Sequence: 54-3465-1 - 3-prime edge 
    CCGTTGATGT TAATTTTGTT TTTGAATAAT TCTGAGTGGG GAATTATATA 
    TAGATGTGAA TTGCATATAC AAATGCATAC CTGAAGCCAA GTAGGCACGT 
    TGCTTTTGTA ACCAGTGGCA AATATGATAG AGTCAAAGTC CTTTTCTTGA 
    CCATCCATAA ACTTTGCTCC TTTCTTTGTT ATTTCCTTTA CACCTTCCAT 
    TATCTTCATT TTTTAACAAT AAGAAAAGAC AACACACTAA TATTAGGTAT 
    GTATATGACT ATATGTGTGT AAGTGTTTGG CAAGTCATGT ATTTAGATAG 
    AGTATTTGTT AAGGAAGAAA GTAAGAAACG AGTAAGTCGG AAACATGGGT 
    TATGGGAATC ATGACGACGA CGAAAAGAAA ATTGGTTTAC GGAAGCATAA 
    ATAGAAAATG CTACAAACAA AAATTAACTT TTTCTGTCAC CATGAACAAG 
    AAAACATTCT TTAAGACTAG AAAAACATTG GCAAGAAAGA GAAATAAAAA 
    TCATCAAAGT AACATTTAAA AACAAGTTCT TTTGTAGTTA CCAGTTTCAA 
    CATAAACCGG TTCTTTTAGA AAGTTGGCTA ATAGTAATAC AATATGATTC 
    CCGTATGCTA TACAGATTTA TAATTTATAA ATAAATTACT AAAAGGTGCC 
    CGCTCTTGGC TACGCAAAAT TGTCACTAAA TTAGAAAATA AAATAAATAA 
    ATAGAAAGAG ATATAGTT

AT4G32540.1

Model type
Protein coding
Short Description
Flavin-binding monooxygenase family protein
Curator Summary
Mutant has elevated levels of free IAA in dominant mutant allele; Flavin Monooxygenase-Like Enzyme; Auxin Biosynthesis
Computational Description
YUCCA 1 (YUC1); FUNCTIONS IN: NADP or NADPH binding, oxidoreductase activity, FAD binding, flavin-containing monooxygenase activity; INVOLVED IN: in 7 processes; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: C globular stage, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Pyridine nucleotide-disulphide oxidoreductase, class-II (InterPro:IPR000103), FAD-dependent pyridine nucleotide-disulphide oxidoreductase (InterPro:IPR013027), Flavin-containing monooxygenase-like (InterPro:IPR020946); BEST Arabidopsis thaliana protein match is: Flavin-binding monooxygenase family protein (TAIR:AT5G11320.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR