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Mutant Lines
54-3490-1

54-3490-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 1; Position: 4866523 [Map]; Strand: w
- AT1G14240.2 - [+] show detail - GDA1/CD39 nucleoside phosphatase family protein
  Distance: 0; Region: exon4 (CDS)
- AT1G14240.1 - [+] show detail - GDA1/CD39 nucleoside phosphatase family protein
  Distance: 0; Region: exon4 (CDS)
- AT1G14240.3 - [+] show detail - GDA1/CD39 nucleoside phosphatase family protein
  Distance: 0; Region: exon4 (CDS)
- AT1G14240.4 - [+] show detail - GDA1/CD39 nucleoside phosphatase family protein
  Distance: 0; Region: exon3 (CDS)

CTCCTGAGTA CTCGCGTACG ATTGCCTACG GAAATATTTC ATACACAATC 
TACAGTCACA GCTTCCTCGA TTATGGGAAG GTAACCTTTT GAGACAAGAG 
GATTTGTGTC TTTGATTCCT TGTTTTTTAA AAGTNGTTTG GAAACGTATT 
AATCGCGTGA ATTATATTTC TTTTCTTTTN NTCATCANAA TTGTTNATAA 
TNNTGCTACC AAANTTGATA ATTTNCATAC CAGCTATGAA CTTTTGTCTC 
CANNCANGAT GCNGNNGTGT NATTGCNNNT GGNAAAACTN CAANANTCAG 
GNNATNNANT CCNTGACNAA TGGGAGNAAG TTGNTCTNCN GAAANNATGN 
TNNCGCGGGC CNAGTACATG TANTGGGANA CATAATTNTT NGGTGTTTCT 
TNNCNNANNN CTCATGGGGN GGNGGGACGG TGCAAAGAGC TAACTNGNNG 
GGNGGNGGGA GGAANAAGNA CNCNCTNGTA CCCCTAGGGG GTCTTCTTCC 
ACNCNNANGG AAAGAATTNC CCCTNCNGAN TCNTNNNTNA ANAAANCNAA 
NAAAANGGCC CCCNAAAAAG CNGGTGGTAA TTNANAAANG CNGNGNCCTT 
CGTTGTNNTT TTNAAANAAA NAAAANGGNN CACCNGGCCC NNNGGGNCNN 
NNNGGGNNNG TNGTTCNNNN ANNNANNATC TTGATTNGNG GGGGGAAAAN 
A

3 prime edge [+] show sequence
1. Chromosome: 1; Position: 4866448 [Map]; Strand: w
  - AT1G14240.2 - [+] show detail - GDA1/CD39 nucleoside phosphatase family protein
    Distance: 0; Region: exon4 (CDS)
  - AT1G14240.1 - [+] show detail - GDA1/CD39 nucleoside phosphatase family protein
    Distance: 0; Region: exon4 (CDS)
  - AT1G14240.3 - [+] show detail - GDA1/CD39 nucleoside phosphatase family protein
    Distance: 0; Region: exon4 (CDS)
  - AT1G14240.4 - [+] show detail - GDA1/CD39 nucleoside phosphatase family protein
    Distance: 0; Region: exon3 (CDS)
Flanking Genome Sequence: 54-3490-1 - 3-prime edge
```
ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATAGG 
CACATGCTCA CTTGACACAA ATGTCACCTA AACATATGCA CAAATAGTCA 
TCACTAACAA TTCGACCATA TACCACAGTT GAAGTCTAAA AATATGTTAC 
AAAGTCAACA TCTAGATTCA NATCCAAATG TAGTATAGTT CTGTNGNNGN 
NAGTTTCTTA ATCCGGACGT ACATNTTAAG TCAACATCAN GATTTAAATA 
ANNAACCCGG GCNGGGCGAC CACGCCCTNC TNNTTAGGGN GTNNAATAAN 
NNNNNNCNNC CNC
```

AT1G14240.1

Model type: Protein coding
Short Description: GDA1/CD39 nucleoside phosphatase family protein
Computational Description: GDA1/CD39 nucleoside phosphatase family protein; FUNCTIONS IN: hydrolase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Nucleoside phosphatase GDA1/CD39 (InterPro:IPR000407); BEST Arabidopsis thaliana protein match is: GDA1/CD39 nucleoside phosphatase family protein (TAIR:AT1G14250.1); Has 1471 Blast hits to 1463 proteins in 237 species: Archae - 0; Bacteria - 39; Metazoa - 609; Fungi - 317; Plants - 332; Viruses - 0; Other Eukaryotes - 174 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G14240.2

Model type: Protein coding
Short Description: GDA1/CD39 nucleoside phosphatase family protein
Computational Description: GDA1/CD39 nucleoside phosphatase family protein; FUNCTIONS IN: hydrolase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Nucleoside phosphatase GDA1/CD39 (InterPro:IPR000407); BEST Arabidopsis thaliana protein match is: GDA1/CD39 nucleoside phosphatase family protein (TAIR:AT1G14250.1); Has 1471 Blast hits to 1463 proteins in 237 species: Archae - 0; Bacteria - 39; Metazoa - 609; Fungi - 317; Plants - 332; Viruses - 0; Other Eukaryotes - 174 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G14240.3

Model type: Protein coding
Short Description: GDA1/CD39 nucleoside phosphatase family protein
Computational Description: GDA1/CD39 nucleoside phosphatase family protein; FUNCTIONS IN: hydrolase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Nucleoside phosphatase GDA1/CD39 (InterPro:IPR000407); BEST Arabidopsis thaliana protein match is: GDA1/CD39 nucleoside phosphatase family protein (TAIR:AT1G14250.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G14240.4

Model type: Protein coding
Short Description: GDA1/CD39 nucleoside phosphatase family protein
Computational Description: GDA1/CD39 nucleoside phosphatase family protein; FUNCTIONS IN: hydrolase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Nucleoside phosphatase GDA1/CD39 (InterPro:IPR000407); BEST Arabidopsis thaliana protein match is: GDA1/CD39 nucleoside phosphatase family protein (TAIR:AT1G14250.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR