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54-3525-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 23409539 [Map]; Strand: w
      • AT3G63380.1 - [+] show detail - ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase famil...
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 54-3525-1 - 5-prime edge 
    CCAACAACAA CGTCAAAGAT GGAGATATGT TGCCGCCTGC TGTCCCGAAG 
    GACTTCCACT TTGATGTTAT TGCTTATCTT GGACAGCTTG TCGAACTGTC 
    TCTCCTGCCT AAAGTTGCTG AGAGCAGAGA CAACTATGAC CAAGAAGACT 
    GCTACAAAGA TGCTTCCGCC TTCATACCAA CCTTCTTTGA TGCCATGTTC 
    TTTGATACCG AAGCCAAGGG AGAAAATAGC GCAGACCAAC AAGATCAAGA 
    TGGTTAGGTC TTTGAAAGCT

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 23409423 [Map]; Strand: w
      • AT3G63380.1 - [+] show detail - ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase famil...
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 54-3525-1 - 3-prime edge 
    GTTGTTGGTG ATGTTGTCTT CTTGAAGATC GGAGATCAGA TTCCCGCTGA 
    TGGTCTGTTC TTGGAAGGGC ATTCACTTCA GGTGGACGAG TCTAGTATGA 
    CAGGAGAGAG TGACCATCTT GAAGTGGACC ACAAGGATAA TCCCTTCTTG 
    TTCTCAGGGA CAAAGATAGT CGATGGGTTT GCTCAAATGC TCGTTGTCTC 
    TGTGGGTATG AGTACAACCT GGGGACAGAC GATGAGCTCC ATAAATCAAG 
    ATTCCAGCGA GAGAACACCT TTGCAAGTCC GTCTTGACAC GCTGACCTCC 
    ACCATCGGAA AAATTGGTCT TACGGTGGCA GCACTTGTTC TGGTAGTTCT 
    ATTAGTCCGT TACTTCACTG GGAACACAGA GAAAGAGGGC AAAAGAGAAT 
    ACAACGGGAG CAAAACACCT GTGGACACTG TGGTCAATTC CGTTGTGCGA 
    ATCGTGGCAG CTGCAGTAAC CATTGTCGTA GTAGCTATCC CAGAAGGCTT 
    GCCATTGGCT GTGACTCTGA CGCTGGCTTA CTCCATGAAG AGAATGATGT 
    CTGATCAAGC TATGGTCAGA AAGCTCTCGG CATGCGAGAC GATGGGCTCA 
    GCGACAGTGA TATGCACAGA CAAAACAGGT ACTTTAACAC TGAACGAGAT 
    GAAGGTTACC AAGTTTTGGC TTGGCCCAAG AGTCAATCCA TGAAGACTCT 
    ACCAAATGAT CTCACCCN

AT3G63380.1

Model type
Protein coding
Short Description
ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein
Computational Description
ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein; FUNCTIONS IN: calcium-transporting ATPase activity, calmodulin binding; INVOLVED IN: calcium ion transport, cation transport, metabolic process, ATP biosynthetic process; LOCATED IN: membrane; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: ATPase, P-type, ATPase-associated domain (InterPro:IPR008250), ATPase, P-type, calcium-transporting, PMCA-type (InterPro:IPR006408), ATPase, P-type, H+ transporting proton pump (InterPro:IPR000695), ATPase, P-type cation-transporter, N-terminal (InterPro:IPR004014), Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter (InterPro:IPR001757), ATPase, P-type phosphorylation site (InterPro:IPR018303), ATPase, P-type cation-transporter, C-terminal (InterPro:IPR006068); BEST Arabidopsis thaliana protein match is: ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein (TAIR:AT3G22910.1); Has 46574 Blast hits to 34715 proteins in 3214 species: Archae - 909; Bacteria - 32032; Metazoa - 4086; Fungi - 2666; Plants - 2162; Viruses - 3; Other Eukaryotes - 4716 (source: NCBI BLink).
Link
InterPro Scan - TAIR