1. Home
  2. Mutant Lines
  3. 54-3563-1

54-3563-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 1060022 [Map]; Strand: w
      • AT1G04100.1 - [+] show detail - indoleacetic acid-induced protein 10
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 54-3563-1 - 5-prime edge 
    GGGATAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATGGCA GGAAAGTGGG ACCAAACGCT CTGCTGATTC 
    TTCTCCGGCT GCCGCCTCAA ACGCAACCAG GTAAAAAATT CATCTTCGAG 
    ACTTTATATT ATAACCTATA TGAATGATTG GTCTCAGATT GCTTATTGTT 
    ACAGAATCAA AGCAACTTAG AGGATAGAGC TTTTAGACCT TAAACTTTGA 
    GAATGAATGA ATCACAGGAT TGAATCAAAT AGAGTGTTCC CTGAAATGTT 
    TAGTTAAACT TTTGAATCAT ATTGGTTTAT ACTTGTTCGT CTTTTGATTT 
    AATATCTTTT GGTAATGGAG CAGACAAGTT GCTGTAGGTT GGCCGCCTCT 
    ACGGACTTAC AGAATCAACA GTTTGGTCAA TCAAGCAAAG TCTTTAGCTA 
    CGGAAGGCGG CTTGAGTTCT GGCATTCAAA AGGAGACTAC AAAAAGTGTA 
    GTGGTTGCTG CTAAGAACGA TGATGCTTGC TTTATCAAAT CGTCCAGGAC 
    TTCTATGCTT GTGAAGGTGA CAATGGACGG AGTTATAATT GGAAGGAAGG 
    TTGATCTCAA TGCTCTGGAT TCTTATGCAG CCTTGGAGAA AACTTTGGAT 
    CTAATGTTTT TCCAGATTCC TTCTCCTGTA ACAAGTCAGT TACTAATTCT 
    GTTTCATGAG ATTCCATGTG ATTCTGTTTT TCAAATTCTG TGTCTCTTGA 
    AATTGACTGG TTTTGATTGA TCGATTTGTA GGAT

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 1060018 [Map]; Strand: w
      • AT1G04100.1 - [+] show detail - indoleacetic acid-induced protein 10
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 54-3563-1 - 3-prime edge 
    AATGAAACGG TAGAGGTATT TTACCGCCGT TACCGACCGT TTTCATCCCC 
    CTGGTCAGAG AAGAAGACGA GGAAGACAAA GACGATCGAA CCTTCCGACG 
    ACCAATGCTA AGACCCAAAG CTAGGTCGAG CTCTGTCTCT GACACTGACT 
    CGTCGGGGCA AGATGAATCC TCCGACGAAT GTGCGGCGTT TTCGTCTTCT 
    TCAGCTGGTA GTCCGATCAT CACCGACCCA CTTGACGAAC AAACTTCTTG 
    CAAACCATTC ATTATCCCAA ATTGCCAAAC GAATACACAA AGCAAGAACA 
    CTAAAACCCT TGATTCAAAT CCAATTATCG ATCAAGTTTG AAGAAACCCA 
    TTAACCAAGC AAACCAAAAA AAAGGTTTCA ACTTTCAACA CCTCTACGAT 
    TCTGAATTTC GAGACAGAAA AAAAAAAAAA NTTGGGGGNC CCCCCGGGTT 
    NNCCNCCCGG GNCNGNNANC CCGNNGNNNN NTTTTAAA

AT1G04100.1

Model type
Protein coding
Short Description
indoleacetic acid-induced protein 10
Curator Summary
Auxin induced gene, IAA10 (IAA10).
Computational Description
indoleacetic acid-induced protein 10 (IAA10); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to auxin stimulus, response to chitin; LOCATED IN: nucleus; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Aux/IAA-ARF-dimerisation (InterPro:IPR011525), AUX/IAA protein (InterPro:IPR003311); BEST Arabidopsis thaliana protein match is: indole-3-acetic acid inducible 11 (TAIR:AT4G28640.3); Has 1513 Blast hits to 1512 proteins in 70 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1512; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
Link
InterPro Scan - TAIR