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54-3575-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 26463735 [Map]; Strand: c
      • AT5G66230.2 - [+] show detail - Chalcone-flavanone isomerase family protein
        Distance: 0; Region: exon7 (CDS)
      • AT5G66230.1 - [+] show detail - Chalcone-flavanone isomerase family protein
        Distance: 0; Region: exon3 (CDS)
    Flanking Genome Sequence: 54-3575-1 - 5-prime edge 
    CCTGGAGATT GATCTTTGGC CTCCACAATC TCTTCATCTT CACTGTCATA 
    CACAAATCTA GTGTGTTTCC CTGCAAAGTC AGTCTCTACG CTCATCTTCC 
    TAATTCCCTC ACACAACCCA TCCACAATCC CTCCCTCTTC TTCCTCCTCT 
    TCCTCGTCGT AGTATTCCTC ATCATATTCC TCACCGTAAG AATAGGCTTC 
    TTCCTCTTCA TCATCATACT CTTCGTCTTT GGCACTTGCA TTGGCCTGCA 
    TCGACCACAC CGACGAGTTA TCATCCTCTG GGTTTTGAGT CACCACAGAT 
    GAGCAGTCTG AGCTCTCCCA TAATTCTGAT TTATCACTAA AGTCCAGAAG 
    CAATGACCGA GTAATGCTCG GGCTCTTCTC TAACTCCAAG CT

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 26463851 [Map]; Strand: c
      • AT5G66230.2 - [+] show detail - Chalcone-flavanone isomerase family protein
        Distance: 0; Region: exon7 (CDS)
      • AT5G66230.1 - [+] show detail - Chalcone-flavanone isomerase family protein
        Distance: 0; Region: exon3 (CDS)
    Flanking Genome Sequence: 54-3575-1 - 3-prime edge 
    TCTCCAGGAG TGTTGCGTTT GAAAGGCTTT CCTACACCGA CAGGAAAACA 
    TGTCAGATTT GCCGGTGATG AATGAGTTCA GTTTGAATCT TTCTTCTTGG 
    AGTTGTGACA AAAAGCCTCA TATGTCTCGA CTTTTTTTTT TTTTTTTTTT 
    TNNNGNNGNN TNNAAANTCN AAAAATNGAN TTTNNNTTNN NCCCTNGGGN 
    TTTTTTTAAA AAACNAAAAG GGNANNCGNA ANNANANCTT TTTTATTTTT 
    NNTTTTNTTT GNNTNGNGGN AAAAANGGGN TTTAANNNGG NNNTTTNNNN 
    ANCCCTTAAA AANAAAANCC NGCCNTANCC CNTTNAAAAA ANAAANNTTT 
    GNTTTTAAAN NNNANAAANT TGNGAAAAGG NGGNTTTNTT TNGNTNCCCC 
    CCCCCNNCCC CNAAAAAAAA AAAAAACCTN NGGGGTTTNN NGNNGTANAA 
    AANAAANCCC CNNNNNTTGG GNNANTNNNN CCCNCNAAAA AAANTTTTTN 
    NNAAAAAANT TNNTNCCCCN AGNNCNNNTT TTTTAAAAAA ANCCNGGNNN 
    AAAATAAAAA AANNTTTTTT TTTTTTAAAA NCNNCCCAAA TTTNNNTTTT 
    TTTCNGGGGG GAAANANCCC CNTTNTCTTT TTNNCGCNCN TTTTTNAATT 
    TTNGTTTTNN CCCGGGGGNG CNNCNNAATN TTTTAANGGG GGAAGNAAAN 
    NGTTAAAANG GGGGNTAATN GGGNGTNCCC

AT5G66230.1

Model type
Protein coding
Short Description
Chalcone-flavanone isomerase family protein
Computational Description
Chalcone-flavanone isomerase family protein; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 8 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G51230.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G66230.2

Model type
Protein coding
Short Description
Chalcone-flavanone isomerase family protein
Computational Description
Chalcone-flavanone isomerase family protein; FUNCTIONS IN: chalcone isomerase activity, intramolecular lyase activity; INVOLVED IN: cellular amino acid derivative biosynthetic process, flavonoid biosynthetic process; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Chalcone isomerase, subgroup (InterPro:IPR003466), Chalcone isomerase, 3-layer sandwich (InterPro:IPR016088), Chalcone isomerase (InterPro:IPR016087); BEST Arabidopsis thaliana protein match is: Chalcone-flavanone isomerase family protein (TAIR:AT5G66220.1).
Link
InterPro Scan - TAIR