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54-3639-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 6680100 [Map]; Strand: w
      • AT3G19274.1 - [+] show detail - unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archa...
        Distance: 1229; Region: intergenic
      • AT3G19280.1 - [+] show detail - fucosyltransferase 11
        Distance: 1096; Region: intergenic
    Flanking Genome Sequence: 54-3639-1 - 5-prime edge 
    ATGATTGGGA GGTTTACATT AGAGCACAAA GAGGGATGAC TCATAGACAC 
    TCCAAAATCG TTTAGAAACT TTGCCGCATG ATATTGAATC TTCTCCTTTT 
    AATTATTCTC TCTTTTTCAC TTATCTTTCT TCCATTTCTG TACGGCTCTT 
    CCTCTATTAT CTTAATTTTA GTTTCCATAT ATATTCACAC ATTATATAAA 
    AAGTGTGTAT ATATTCACAT ATTCAAAGCG TACAAATTCG ATAGATAGAC 
    ATCCATCGCT GTAAAAGATA TGTAGGTGTT ATCAAAGTTA TAAGCACATG 
    CTTGATAGAT AACGTGATTA GGTTAACACT AATATTCCCA CTGATTCAAT 
    TCACACCAAA ACTATAGTTG GAAGACATGT GTTTGGTTCA TATATAAAGC 
    TCGAACAATT AAAAGTGAAT CCAATGTACT ATAAGTGAAT ATATAACCAT 
    ATCACTTATG ATAAAGATGC TACAAGCT

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 6679984 [Map]; Strand: w
      • AT3G19274.1 - [+] show detail - unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archa...
        Distance: 1113; Region: intergenic
      • AT3G19280.1 - [+] show detail - fucosyltransferase 11
        Distance: 1212; Region: intergenic
    Flanking Genome Sequence: 54-3639-1 - 3-prime edge 
    CCAATCATTA CCCACACTCA CTTTATCTCT ACATAGAATA GAAATACTCC 
    CTATTTATAC ATATATAAAC ATCCTAAACA CTGTATATAA GGATGTGTAT 
    CGTAAGAAAA AGAAAAGGGG GCATTATTGA TCATTAAAGG TATGGTGTAT 
    AAGAAGCAAT GTAAAGTTTT GTTTTTCTCC ATGCGTGATC TCAACAAATA 
    TCTACGTCGT CTTCTTTAAT TGTTAAATGG GTTGGGTTAA ATATCTACAT 
    TTGTCCCACA CGAACATATG ACACAAGAAA TAACGAAAGT AAAACAGAAA 
    AAGAAGGTAT ATTTTATGTA TAGTGAAATT CAGAGCAGTG AATGTTTCGT 
    ACTTCAGAAA TGGGTAAGAT TTATTATTAA AAAACCTTAA CAGAGAAAAA 
    TAAAATAAAA GGTATAGAAA AAGGGTTTAC TCGTGTCACT GCCTTGCATG 
    TCAAGTACTA CGATTTCTAA GAATTTTAAT CATTAAGGAT AGTCGTTGAT 
    TTAATAATTA CAAAATTCTA AAAGAACTTG GAGAAAGAGA AAGAGAGCAC 
    TAATTCATAC ATGTGGAGCC AAGTCAGCCA AGTAAGAAAA AAACATAATT 
    CTATGGCTTG CTATGATCAT TAAGTTAAAA TTGTTTTAGT TTAACGACGG 
    TTTTTTGGTC TCCAATCATA ATTAGCTTGN ATCATTTTGG TTTTTTTTTC 
    TTTGAAAAAT TTCGTACCAA ACTAAATGAG TGTGATTCAT AAGAT

AT3G19274.1

Model type
Protein coding
Computational Description
unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G19280.1

Model type
Protein coding
Short Description
fucosyltransferase 11
Curator Summary
Encodes a protein with core α1,3-fucosyltransferase activity.
Computational Description
fucosyltransferase 11 (FUT11); FUNCTIONS IN: 4-galactosyl-N-acetylglucosaminide 3-alpha-L-fucosyltransferase activity, transferase activity, transferring glycosyl groups, fucosyltransferase activity; INVOLVED IN: protein amino acid N-linked glycosylation; LOCATED IN: membrane; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 10 (InterPro:IPR001503); BEST Arabidopsis thaliana protein match is: fucosyltransferase 12 (TAIR:AT1G49710.1); Has 1598 Blast hits to 1593 proteins in 204 species: Archae - 4; Bacteria - 180; Metazoa - 1025; Fungi - 0; Plants - 132; Viruses - 0; Other Eukaryotes - 257 (source: NCBI BLink).
Link
InterPro Scan - TAIR