1. Home
  2. Mutant Lines
  3. 54-3650-1

54-3650-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 26454892 [Map]; Strand: w
      • AT5G66200.1 - [+] show detail - armadillo repeat only 2
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 54-3650-1 - 5-prime edge 
    GTGATTGGAC ACAAGCTCCG ACGTAGCCCA CGCAACCACC GCCTGGACTT 
    TCATAGGCCC TTCTTTGAGG ACTTTGCCGA AGACGGAACA AGCGCCGCCG 
    TGAATCATGT GCTCCACGCT CTCAGGATCA CGTCCCAGTA ACCCTAACGC 
    ACGCGCTGCG TTCTCTTGCC CCTCGGGCTT CCCTTCCTTG AGCAGTTTAA 
    GGAGAGGCAC CACACCTCCT TCCTCTATGA TAAGCT

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 26454770 [Map]; Strand: w
      • AT5G66200.1 - [+] show detail - armadillo repeat only 2
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 54-3650-1 - 3-prime edge 
    ACCCCAAGTG CCAAGACGTC TTCGCTCAGC ACAACGCCAT TCGGCTACTC 
    GTTGGCCACT TGGCCTTCGA AACTGTGCAA GAGCACAGCA AATACGCCAT 
    TGCCACCAAC AACAAAGCTA CTTCCATTCA CCACGCCGTC GCTCTCGCCA 
    AGGAAAATCC TAATTCCACC TCCGCCACCG CCTTGCCCAA GGGTCTTGAT 
    GAGGATCAGA GCTCTATTCC TCATCCTACA GGGAAGCAAA TGCCCAATCA 
    GATGCACAAT GTGGTCGTCA ACACCATGGC GGTTAGGGCA AACCCTCCGA 
    GGAAGTCGAC TAGCAACGGT GTGAGCCAGA GTAATGGTGT GAAGCAACCT 
    AGCAGTCTAC AGCAGCACCA GAATT

AT5G66200.1

Model type
Protein coding
Short Description
armadillo repeat only 2
Curator Summary
Armadillo repeat protein. One of a family of four in Arabidopsis. Expressed in vegetative tissues, anthers and ovules.
Computational Description
armadillo repeat only 2 (ARO2); FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: armadillo repeat only 1 (TAIR:AT4G34940.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR