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54-3666-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 25800764 [Map]; Strand: w
      • AT5G64540.1 - [+] show detail - unknown protein; Has 2125 Blast hits to 1062 proteins in 182 species: Archae ...
        Distance: 0; Region: intron2 (5UTR)
      • AT5G64540.3 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
        Distance: 0; Region: intron3 (5UTR)
      • AT5G64540.2 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
        Distance: 0; Region: exon2 (5UTR)
      • AT5G64541.1 - [+] show detail - unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archa...
        Distance: -550; Region: promoter
    Flanking Genome Sequence: 54-3666-1 - 5-prime edge 
    GGGAAAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATCCAC CACAAAGAAA ATAACAAATC ACCAGAGAAG 
    TCTCGACTTA TTCACTCTTT CTCTCTGCCG CTAAAGCT

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 25800706 [Map]; Strand: w
      • AT5G64540.1 - [+] show detail - unknown protein; Has 2125 Blast hits to 1062 proteins in 182 species: Archae ...
        Distance: 0; Region: intron2 (5UTR)
      • AT5G64540.3 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
        Distance: 0; Region: intron3 (5UTR)
      • AT5G64540.2 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
        Distance: 0; Region: exon2 (5UTR)
      • AT5G64541.1 - [+] show detail - unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archa...
        Distance: -608; Region: promoter
    Flanking Genome Sequence: 54-3666-1 - 3-prime edge 
    TTGGTGATTG CAAATCCTCT GGTGATGTTG ATTAAAAAAA GTCTCATTTT 
    GAAGTCTGGT GATACAAGGA TC

AT5G64540.1

Model type
Protein coding
Computational Description
unknown protein; Has 2125 Blast hits to 1062 proteins in 182 species: Archae - 6; Bacteria - 116; Metazoa - 913; Fungi - 305; Plants - 50; Viruses - 20; Other Eukaryotes - 715 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G64540.2

Model type
Protein coding
Computational Description
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G64540.3

Model type
Protein coding
Computational Description
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; Has 2125 Blast hits to 1062 proteins in 182 species: Archae - 6; Bacteria - 116; Metazoa - 913; Fungi - 305; Plants - 50; Viruses - 20; Other Eukaryotes - 715 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G64541.1

Model type
Protein coding
Computational Description
unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR