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54-3678-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 412443 [Map]; Strand: w
      • AT2G01905.1 - [+] show detail - cyclin J18
        Distance: 0; Region: intron8 (CDS)
    Flanking Genome Sequence: 54-3678-1 - 5-prime edge 
    GGGATAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATCCAC ACATACACAA AAAGATAGAA AGAAGAAAAG 
    TCTATTTCTA TTTATTTCTT CGGGTCCCTC TCCAAAATTT ATTCTTCTTC 
    ATTTATGGAG TCTACACTAC ATTGTTCTGA GATTTGTTCT CTATATACTC 
    CTTTTCAGTT TTTTTTCACA TTTCATGGTA ACAAATAGGA TCTCTTTCGA 
    ACTATACCAA ATTCTAGAAG ACATGATTTC TGTCTAAATC TTTCACCTAC 
    TCTTTTATAT ACACATGTAC ATGTTGATCC ACGTGGTATG AGTCTTTGGT 
    ATAAAGTTAA AAAAATGTTA GGCCTATCTT ATTTTTAGGG ACCATTGTCG 
    AAACTAGAAA GAAGTAGAGT GAGGTTTCTA AGGTTAGGAG AGGGTAGGCA 
    CTAGACATAG TTTTGTTCTG CTTCTGTGTT ACATGACTCT GTTATTAGAG 
    AATAGAAACA ACAAAAATTT AAGACTTAAA GGCAATGATG ACCCTAATTT 
    TTATGAGTAG GGGATGTATA GTTTAATTAT TCATCAATAT TATTTGGCCC 
    TACTTCGACC ACCTACCATT TTCATTTTCA GTTTGATTTT CAAAAAATGG 
    ATATGATGTT GTGAAATAAC AACAACTTCA AATTAAGTAT TTTTGAAATT 
    CAATAGATAG TAAAACCTTC CATTGAGATT TTTAGTTCTT GGATAATGAC 
    AAATATGA

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 412439 [Map]; Strand: w
      • AT2G01905.1 - [+] show detail - cyclin J18
        Distance: 0; Region: intron8 (CDS)
    Flanking Genome Sequence: 54-3678-1 - 3-prime edge 
    TGAAAACGGT AGAGGTATTT TACCGACCGT TACCGACCGT TTTCATAAGT 
    GTGTGAGTGT GTAACAGCTA TAACTCCATG AAAATGAGGT ATGTTTTTTC 
    AATAAGATAA AGGAAATGCT GACGTTTGAC TAGTGACTTC TACTATTACT 
    GTCTCCTATA TCTTATACGG TCCGGTACAA TATTTGAGTG GTCCGGACCG 
    GAGATATGTT AGGTTTAGCA AAATGTTATG GACCACAAAA GATCTGATTG 
    ATCCGTAAAC CGTATATACG TATATGGCCG GTGGTCAGAA CTGATAAGTC 
    AACCTTGATG GGCTCATTAT CATAATAATT AAGTATTAGG TGAGGAACAT 
    ACAATGTCCA GGTCTAAGGG GCAATTTGAA GAAGACCTTG AAGTGTGAAC 
    AAGACACTCT TTTTTGTGAT GTTGAAATGC ATTGTCAAAA AGGTGAACAT 
    TGGGCCTTAT TGATCCTATA TGCTATAACC TGTTTCTAAC TTATTCAGTA 
    TCCTATGACT TGATTAATAT AAATCTATCA TTGGTAATTG TATTTATAAA 
    ATGGTTTTGA TAGAAAGAGC AGAAAGATGA ATGCTTACCC CAGGGGAGAA 
    TAGGGAATT

AT2G01905.1

Model type
Protein coding
Short Description
cyclin J18
Curator Summary
cyclin J18 (cycJ18)
Computational Description
cyclin J18 (CYCJ18); CONTAINS InterPro DOMAIN/s: Cyclin-like (InterPro:IPR011028), Cyclin-related (InterPro:IPR013763), Cyclin, N-terminal (InterPro:IPR006671), Cyclin (InterPro:IPR006670); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR