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54-3710-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 2794291 [Map]; Strand: c
      • AT3G09100.2 - [+] show detail - mRNA capping enzyme family protein
        Distance: -759; Region: promoter
      • AT3G09100.1 - [+] show detail - mRNA capping enzyme family protein
        Distance: -759; Region: promoter
      • AT3G09110.1 - [+] show detail - Protein of unknown function (DUF674)
        Distance: 0; Region: exon3 (3UTR)
    Flanking Genome Sequence: 54-3710-1 - 5-prime edge 
    NTGNAAAACT AACAAAATCC GGTTATACGA TAACGGTCGG TACGGGATTT 
    TCCCATCCTA CTTTCATANT GAATCTNTAT GACCATTACA GNATTGTTAA 
    AGGGTGCCGN CNTAAGAATG CAACATTACT GCAAGTTCCC ACTATGTTGA 
    GGATCTTGAC AACTCTTATG AAGAAATCTT ACAGAGAAAT GTCTCAAATG 
    TATGACNGTG ATTGTATTAT CTTTGTTATT GTGATGTTTC TTGAATCTAT 
    TTTGAACTGG AATATCTCTT TTTAAATGAT ATTCAACAGA TTCAGACAAC 
    GAAGACTAGA TGAATCATGA AGGTAGAGTA GAAGAAACAA ACTTTCTGAT 
    TCATCTTAGA AGTTAGAACG ATTACATAGG AGCCTCTTAT ATACGTAGAG 
    CGTTCTGGTT TACAACCACT TAACCGAGAT AAATTATATG GTTGTTTCAA 
    CGTGGATAAT CTTATAGAGT TTTTTTTTTN TATTTTAAAA AAAAATTNGN 
    CATTTTCCAA ATAATAACTN GTCCAANCCA ATTTTTNTTT TTTANCTTTT 
    GCNTTAAAAT TNCAAAAAAA AANTGGNNTT TTTNCCNCCA ANTTTTANCN 
    TCCGGGGNNT TTNTTTTNCC CTNTTTTNAT TTTTAAANCT TTGCAANTGG 
    GAAAAGGAAT CCTCNAAAAA CCGNGAAAAA GGGATNGTTT TTTCNTCCCN 
    GNNTTTAANT TTNCAGGGGN TTTTNGGNNT TTNCCNATTG GNATTTTTTG 
    GAAAACCAAA AANTTTTNNC CTNGCC

AT3G09100.1

Model type
Protein coding
Short Description
mRNA capping enzyme family protein
Computational Description
mRNA capping enzyme family protein; FUNCTIONS IN: phosphatase activity, protein tyrosine phosphatase activity, protein tyrosine/serine/threonine phosphatase activity, mRNA guanylyltransferase activity, polynucleotide 5'-phosphatase activity; INVOLVED IN: protein amino acid dephosphorylation, mRNA processing, mRNA capping, dephosphorylation; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein-tyrosine phosphatase, active site (InterPro:IPR016130), Dual-specific/protein-tyrosine phosphatase, conserved region (InterPro:IPR000387), Dual specificity phosphatase, catalytic domain (InterPro:IPR000340), mRNA capping enzyme (InterPro:IPR001339), mRNA capping enzyme, bifunctional (InterPro:IPR017074); BEST Arabidopsis thaliana protein match is: mRNA capping enzyme family protein (TAIR:AT5G01290.1); Has 815 Blast hits to 810 proteins in 227 species: Archae - 0; Bacteria - 0; Metazoa - 317; Fungi - 230; Plants - 80; Viruses - 64; Other Eukaryotes - 124 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G09100.2

Model type
Protein coding
Short Description
mRNA capping enzyme family protein
Computational Description
mRNA capping enzyme family protein; FUNCTIONS IN: in 7 functions; INVOLVED IN: in 7 processes; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold (InterPro:IPR012340), Dual-specific/protein-tyrosine phosphatase, conserved region (InterPro:IPR000387), Dual specificity phosphatase, subgroup, catalytic domain (InterPro:IPR020422), ATP dependent DNA ligase, central (InterPro:IPR012310), mRNA capping enzyme (InterPro:IPR001339), mRNA capping enzyme, bifunctional (InterPro:IPR017074), Protein-tyrosine phosphatase, active site (InterPro:IPR016130), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Dual specificity phosphatase, catalytic domain (InterPro:IPR000340), mRNA capping enzyme, C-terminal (InterPro:IPR013846); BEST Arabidopsis thaliana protein match is: mRNA capping enzyme family protein (TAIR:AT5G01290.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G09110.1

Model type
Protein coding
Short Description
Protein of unknown function (DUF674)
Computational Description
Protein of unknown function (DUF674); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF674 (InterPro:IPR007750); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF674) (TAIR:AT5G01150.1); Has 327 Blast hits to 250 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 325; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR