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54-3755-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 375647 [Map]; Strand: w
      • AT4G00890.1 - [+] show detail - proline-rich family protein
        Distance: -297; Region: promoter
    Flanking Genome Sequence: 54-3755-1 - 5-prime edge 
    CGTTCAAGTT CAACAATGTA AGAGTTGACT AGGACGTGTT GAATTAATTA 
    TTAACAAGGC CTAGGGAGAC ATTAATAGGC TTTGGGCCAT TACTTTAAAA 
    GCCCAACTTA AAACNGTCAA CNTTGGGAGA CAATTTTTTG AGTAAGCGTT 
    GTCATGTCTC CTTTTGAACA CAACAAACCT CTAAAATCTC TTTTTACTCT 
    ACATATCCTT TTTTTAAATG AATTATATTT AGACGATTTT GCCCTTATCA 
    ATATTTAAAA AAAAAANCNT AANTTAAANT TAAAACCNGA AAACCAAAAA 
    NTNGAACCAA AAAAATTCGT TAACTACATA CTTNTCCGGG NAGTCCNNGG 
    NGCTNTACNT NGNNGNCGTT NNTTANAANC NGNGTNGANC TNTNAAGNCC 
    ANCTTTGTTT NTAGTAAAAN AATCCAAAAG CTN

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 375583 [Map]; Strand: w
      • AT4G00890.1 - [+] show detail - proline-rich family protein
        Distance: -233; Region: promoter
    Flanking Genome Sequence: 54-3755-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCC 
    GACTTGAACG TATTGCAAGT TTGTTAGTTT GTTTTCCCCT GAAATGAAAG 
    GTATACGAAC ACGTGATTTG TGAAATGACA TAAAAGGTGA ATCCGATACT 
    TTTCTTTCTG TTACCAATAT ACTTAGTCTC AAGAAGGTAT GTTTCGTGTA 
    TGTTAAAGTT GTCTCCTCTC GTTCATATCT ATTTTAGCCA AACATATGCA 
    TACATTTCTA AATAGTTTAT GAGAATATAA CACTAATGTT TAATAATCGA 
    CAATCTCGCC GGAGATTCCG GTTAGGAAAC TTAGCTAGAC TTGTCCAACT 
    GCGGCAAAGC GTCAGCAGCC AACCCCCACG AAGGACTCTT CAAGACACTT 
    TGTCTCAATC ACCACCACAG TCACCGCTAT TTCATCCACA ATCACCACCG 
    GAACCAAAGT CTTTACCCTT GTCGCCGTTA TCACCAAAAT CAAAGGAAGA 
    GCCTCAATCG CAGCCAATGA CACCACTGAT GTCAAAACAT GTCAAAACAA 
    ATCGAAATCT ACTTATCCAA TCACCACCTA AGTCGCCGCC AGTATCCACT 
    AAATCTCAGC AGCAATTTCT AGCATCAGTG CCTCTTCGAC CGCTAACAAC 
    AGAACCAAAA ACACCATTGT CCCCCTCTCC AACGCTAAAG GCTACCAAAG 
    AATCTCAGTC CCAACCGTCT CCACCGCTTG AATCTATCGT TGAAACTTGG 
    TTCCGACCAT CGCCTTCAAC ATTAACAGAA ACT

AT4G00890.1

Model type
Protein coding
Short Description
proline-rich family protein
Curator Summary
Encodes a putative glycosyl hydrolase family 10 protein (xylanase).
Computational Description
proline-rich family protein; Has 74402 Blast hits to 44432 proteins in 1604 species: Archae - 100; Bacteria - 7075; Metazoa - 32308; Fungi - 16616; Plants - 5983; Viruses - 2030; Other Eukaryotes - 10290 (source: NCBI BLink).
Link
InterPro Scan - TAIR