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Mutant Lines
54-3815-1

54-3815-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence
1. Chromosome: 5; Position: 24752684 [Map]; Strand: w
  - AT5G61560.2 - [+] show detail - U-box domain-containing protein kinase family protein
    Distance: -166; Region: promoter
  - AT5G61560.1 - [+] show detail - U-box domain-containing protein kinase family protein
    Distance: -184; Region: promoter
Flanking Genome Sequence: 54-3815-1 - 5-prime edge
```
NNGAATAAAA CTAACAAAAT CGGTTATACG ATAACGGTCG GTACGGGATT 
TTCCCATCCT ACTTTCATCT GAGCCCAAAA ATTGAAAAGT CAACAAAATT 
GAATAAAGAA CAAGTTGGTA GTCCGACAAA AGCCCAGTTG TTCTGACTTT 
CAACGTCATC AAAACTAAGG AAACTACCGG AAAAGACATC ACATATTCAC 
ACTGAACTCT TCTAGACTTT TTTGACATTT TCATTTCTCT CATCGTTTTC 
TTTTTTATCA TTACTTCTTT GAATCTTTGG TTATAACCAT TAAAGAATT
```
3 prime edge [+] show sequence
1. Chromosome: 5; Position: 24752669 [Map]; Strand: w
  - AT5G61560.2 - [+] show detail - U-box domain-containing protein kinase family protein
    Distance: -181; Region: promoter
  - AT5G61560.1 - [+] show detail - U-box domain-containing protein kinase family protein
    Distance: -199; Region: promoter
Flanking Genome Sequence: 54-3815-1 - 3-prime edge
```
ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCC 
TTATGAATGA ATATAGGTTT CATTTTCTGC CAAAATACAA TTTTGTTTTT 
GATTTTCTTG TTCAGCTATA TTATCGTGTT TTTCTTTTGC GAATTTTTTT 
GTTTTTTCTT CTAAACTTTT GACTAATAAA TTTCAAGTTA TGTGAATAGG 
TAAAGTAAAC AAAAGTTTAG TCAACTCTAA AGATTCTTTT CGATTTACAG 
GAGAGGATTT CTCTTTTCGA TAAGTGGAAG AAACTATCGA TATGAAAGCT
```

AT5G61560.1

Model type: Protein coding
Short Description: U-box domain-containing protein kinase family protein
Computational Description: U-box domain-containing protein kinase family protein; FUNCTIONS IN: ubiquitin-protein ligase activity, protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, protein ubiquitination, response to stress; LOCATED IN: chloroplast, plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: UspA (InterPro:IPR006016), Protein kinase, ATP binding site (InterPro:IPR017441), U box domain (InterPro:IPR003613), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: U-box domain-containing protein kinase family protein (TAIR:AT4G25160.1); Has 112471 Blast hits to 110615 proteins in 4538 species: Archae - 130; Bacteria - 13122; Metazoa - 41054; Fungi - 8748; Plants - 32669; Viruses - 288; Other Eukaryotes - 16460 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT5G61560.2

Model type: Protein coding
Short Description: U-box domain-containing protein kinase family protein
Computational Description: U-box domain-containing protein kinase family protein; FUNCTIONS IN: ubiquitin-protein ligase activity, protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, protein ubiquitination, response to stress; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: UspA (InterPro:IPR006016), Protein kinase, ATP binding site (InterPro:IPR017441), U box domain (InterPro:IPR003613), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: U-box domain-containing protein kinase family protein (TAIR:AT4G25160.1).
Link: InterPro Scan - TAIR