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Mutant Lines
54-3838-1

54-3838-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 5; Position: 26463764 [Map]; Strand: w
- AT5G66230.2 - [+] show detail - Chalcone-flavanone isomerase family protein
  Distance: 0; Region: exon7 (CDS)
- AT5G66230.1 - [+] show detail - Chalcone-flavanone isomerase family protein
  Distance: 0; Region: exon3 (CDS)

GTGTGAGGGA ATTAGGAAGA TGAGCGTAGA GACTGACTTT GCAGGGAAAC 
ACACTAGATT TGTGTATGAC AGTGAAGATG AAGAGATTGT GGAGGCCAAA 
GATCAATCTC CAGGAGTGTT GCNGTTTGAA AGGCTTTCCT ACACCGACAG 
GAAAACATGT CAGATTTGCC GGTGATGAAT GAGTTCAGTT TGAATCTTTC 
TTCTTGGAGT TGTGACAAAA AGCCTCATAT GTCTCGACTT TTTTTTTTTT 
TTTTTTTNGG GGGGGGNNNA AAAANNNNAA AATTNNTTTT TNNTTNNCCC 
CTNNGNNTTT TTTTNAAAAN NNAAAANGGN NNCCGNAANN AANCCNTTTT 
NNTTTTNNNN NNNNNTNNNN GGGGGGAAAA AANGGGTTTN AATTNGGGNN 
NTNNCCNANC CCNTAAAAAA AAAANCCNGN CNTTCCCCNT TTNAAAANNA 
AANNTTTTNT TTNAAANNNN NNNANTTTNG GAAAAGTNNN TTTTTTTTNN 
TTNCCCCCCC CCNNCCCTTN AAAAAAAAAA AAACTTTNGG GGTTTTTNTN 
NTTNNAAAAA AAAANCCNCG NNTTTGGGGA ATTGNNCCCC NNNAAAANAN 
TTTTTTNAAA AAAAATTTTT TTNCCCTNNN CNTTTTTTTN NNNANNAACC 
CNGGTTNNAA AAAAAAATTT TTTTTTTTTT TTAAACCCCC CAAATTTTTN 
TTTT

3 prime edge [+] show sequence
1. Chromosome: 5; Position: 26463648 [Map]; Strand: w
  - AT5G66230.2 - [+] show detail - Chalcone-flavanone isomerase family protein
    Distance: 0; Region: exon7 (CDS)
  - AT5G66230.1 - [+] show detail - Chalcone-flavanone isomerase family protein
    Distance: 0; Region: exon3 (CDS)
Flanking Genome Sequence: 54-3838-1 - 3-prime edge
```
CCTCACACAA CCCATCCACA ATCCCTCCCT CTTCTTCCTC CTCTTCCTCG 
TCGTAGTATT CCTCATCATA TTCCTCACCG TAAGAATAGG CTTCTTCCTC 
TTCATCATCA TACTCTTCGT CTTTGGCACT TGCATTGGCC TGCATCGACC 
ACACCGACGA GTTATCATCC TCTGGGTTTT GAGTCACCAC AGATGAGCAG 
TCTGAGCTCT CCCATAATTC TGATTTATCA CTAAAGTCCA GAAGCAATGA 
CCGAGTAATG CTCGGGCTCT TCTCTAACTC CAAGCT
```

AT5G66230.1

Model type: Protein coding
Short Description: Chalcone-flavanone isomerase family protein
Computational Description: Chalcone-flavanone isomerase family protein; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 8 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G51230.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT5G66230.2

Model type: Protein coding
Short Description: Chalcone-flavanone isomerase family protein
Computational Description: Chalcone-flavanone isomerase family protein; FUNCTIONS IN: chalcone isomerase activity, intramolecular lyase activity; INVOLVED IN: cellular amino acid derivative biosynthetic process, flavonoid biosynthetic process; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Chalcone isomerase, subgroup (InterPro:IPR003466), Chalcone isomerase, 3-layer sandwich (InterPro:IPR016088), Chalcone isomerase (InterPro:IPR016087); BEST Arabidopsis thaliana protein match is: Chalcone-flavanone isomerase family protein (TAIR:AT5G66220.1).
Link: InterPro Scan - TAIR