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Mutant Lines
54-3909-1

54-3909-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 5; Position: 25513733 [Map]; Strand: w
- AT5G63750.1 - [+] show detail - RING/U-box superfamily protein
  Distance: 0; Region: exon3 (CDS)

GNGATAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
CCCATCCTAC TTTCATCCCT TTCCAGCAGA AACGACCGCT AGATCAAGAA 
ACACACAAAT TAGTATGATC AATAATGCTT CAAATAGAGA AATCTAATTT 
GCAAAATAGG GTTTCTTACC TGCAGGCACA AGTCAAGAAC CGGAGGTATT 
GTTTAGTACC AAGATCCGCA GGACGAAGAC AATGAGGGCA AACTTTCTTG 
GTGGCTTTGA TCGAGGAGAG AGGGTAAGTC TTTTCTCTGG TTTCGAACGA 
GGAGAGGCTC AATGGCTTTT CACCTGATTC CTTCGATAAG CTATTTAGGT 
CTCGAAACAA CCAATCAGAC GCGTTGTTGC AGGTCACTGG TTTGTGTGAC 
TCAAGCATGC ATCTCCAGCA GAAGATATGA CCACAGAGAC ACACCACGTT 
GAAGCCATAG TCTTCCTGAT CAGCACCATC ATGATTCTTC TGATGAAACT 
CAATGACGTA ATTGCAATCC TGTGCAGGAC AGTATTTGAT CTCCAATACC 
TTGTTTCCCT CAATGTAAGA TCTCAGAATA TACTCCACGT ACATCTCTTG 
ATCACATACG GTTAGCTTCT GAATCGTGTC CGGTCCAACC GCGGCTTGAC 
AAGCTCCATG AGGACAAGAG ATTCGAGTTT GGGGTTTTCT CCACCAAGTA 
GAAATTCTTT TCAAGATACT TTCTCCAACA AGATTTGCAG AACATGTGAG 
AGCAAAGGGC GTGGAGATTA AGTAATCACC ATCATCACAA GTCTT

3 prime edge [+] show sequence
1. Chromosome: 5; Position: 25513734 [Map]; Strand: w
  - AT5G63750.1 - [+] show detail - RING/U-box superfamily protein
    Distance: 0; Region: exon3 (CDS)
Flanking Genome Sequence: 54-3909-1 - 3-prime edge
```
TGAAAACGGT AGAGGTATTT TACCGACCGT TACCGACCGT TTTCATCCCC 
TGGAAGTGTA TGCAGCCAGA GGAAGCCCAC AAAACGGAAT CAGGATTCTA 
TAAATTCTGT AATGTATCGA TGACATTCGA GGGAAGAGCA CCCAAGACAC 
TCGAGGGAAG AGCAGAACCG GAGAATT
```

AT5G63750.1

Model type: Protein coding
Short Description: RING/U-box superfamily protein
Computational Description: ARIADNE 13 (ARI13); FUNCTIONS IN: zinc ion binding; LOCATED IN: intracellular; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Zinc finger, C6HC-type (InterPro:IPR002867), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, RanBP2-type (InterPro:IPR001876); BEST Arabidopsis thaliana protein match is: IBR domain-containing protein (TAIR:AT5G63730.1); Has 1670 Blast hits to 1662 proteins in 206 species: Archae - 0; Bacteria - 0; Metazoa - 716; Fungi - 141; Plants - 537; Viruses - 0; Other Eukaryotes - 276 (source: NCBI BLink).
Link: InterPro Scan - TAIR