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54-3980-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 14974848 [Map]; Strand: c
      • AT4G30720.1 - [+] show detail - FAD/NAD(P)-binding oxidoreductase family protein
        Distance: 0; Region: exon3 (CDS)
    Flanking Genome Sequence: 54-3980-1 - 5-prime edge 
    TGGAAAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATCCCC CTTGAGTTAG AGCCTCGTGC TCATGATTTC 
    ATTTTCCGGT TAGAGCCTAA GATTGGGCTT ATTGAACATG TGCCTACCGA 
    GAAGAGTGTT TCAGGGGACT TGATCAGTGT GGTGAATGAC NTGTAAAAGG 
    ATCAACAGTG AGACAGCATC CGGAGAATAT GAACCTCAGA TTATCAATGG 
    CTCTGGAGAT CCACACCATC ATGGAGGAGG ACGAAGCAAA CCGAAAATTG 
    CAGTTGTTGG TGGTGGTCCA TCGGGTTTGT TTGCTGCTCT TGTACTTGCA 
    GAGTTCGGTG CAGATGTGAC ATTGATTGAA AGAGGGCAAG CAGTAGAAGA 
    AAGGGGACGT GATATAGGCG CTTTGGTAGT TCGCAAGATT TTGGATATGG 
    AGAGTAATTT CTGCTTTGGC GAGGTTTAAA AAACCTTCTC TTCAGTCTTT 
    TGCTAGTTTT CTTTGTTATT GTCAAAGTCA TCTTTTAGCA CTTATGCATC 
    GCAGGGTGGT GCAGGTACTT GGAGTGATGG AAAGCT

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 14974851 [Map]; Strand: c
      • AT4G30720.1 - [+] show detail - FAD/NAD(P)-binding oxidoreductase family protein
        Distance: 0; Region: exon3 (CDS)
    Flanking Genome Sequence: 54-3980-1 - 3-prime edge 
    TTGATACGGT AGAGGTATTT TACCGCCGTT ACCGACCGTT TTCATCACAA 
    GGAGCGTCTT CACATCCAAA TCCACAGTGT AAACAAACTT GGCTTCTTTC 
    AGAATCTAAA CAAAAGATGA AAACTTCACT CACTTGAAAC TACAATACAA 
    CATAATATGT GGAATCAAAC TGAAACCTAC CTTCCTAGCG TCAAAAGATT 
    TCCTAATCAC TGAAAATGCT TCTTCTGGCA GCATTGAAGC AACCTGAAAC 
    AAAACCCAAT TTATCAAAAA AAATCCAATA TCATCATACG CATAAGATAA 
    AGTTTCGAAC TTTCCACCGG AGAACTCACC GGAAACTCGA TAACTTTAGC 
    GATGGCTTGA AGCAAACCTT CTGAAATCCC GAGAAAGTCC TTTCCAGGGT 
    CATCTCCAAC AGGAACTCCG AGCTTAGAGA GACGCCAAAC TCCTTCAAGC 
    T

AT4G30720.1

Model type
Protein coding
Short Description
FAD/NAD(P)-binding oxidoreductase family protein
Curator Summary
Encodes a putative oxidoreductase/electron carrier detected in the chloroplast stroma that is essential to ensure a correct electron flow through the photosynthetic chain and, hence, photosynthesis efficiency and normal growth. Mutations in the Col-0 allele result in pale green pigmentation and defective growth.
Computational Description
FAD/NAD(P)-binding oxidoreductase family protein; FUNCTIONS IN: oxidoreductase activity, FAD binding; INVOLVED IN: photosynthesis; LOCATED IN: chloroplast; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Adrenodoxin reductase (InterPro:IPR000759), FAD dependent oxidoreductase (InterPro:IPR006076), Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region (InterPro:IPR001327); Has 2466 Blast hits to 2466 proteins in 951 species: Archae - 126; Bacteria - 2117; Metazoa - 0; Fungi - 2; Plants - 26; Viruses - 0; Other Eukaryotes - 195 (source: NCBI BLink).
Link
InterPro Scan - TAIR