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54-4002-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 9289731 [Map]; Strand: c
      • AT1G26810.1 - [+] show detail - galactosyltransferase1
        Distance: 0; Region: intron1 (5UTR)
    Flanking Genome Sequence: 54-4002-1 - 5-prime edge 
    CTTAATTTTG CTTCCCTTTG GCCTGTAAGC AGATTTTCAA TTTTTGCTCT 
    GTGTTTGATT TTCTTATATA GTTGGTTTAG TAAGTTCTTC TATGAAGTGA 
    GAACAATTCT GGGCACNTTC TGATTTTTTA GTCTCTAGTG ATTTTAACTA 
    GTCTATTGTG ATTTTGTTGA ATTTCAATTT TCTCAGACTT AACTGATAAA 
    AATCTGATTT TTTTTCTTCT TCTTATTGTT AAGCT

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 9289847 [Map]; Strand: c
      • AT1G26810.1 - [+] show detail - galactosyltransferase1
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: 54-4002-1 - 3-prime edge 
    AAATTAAGCA ATGTCTGTTC CGGAATCAGA ATCCGGTACA CCGGCAAACA 
    GAGAAGTAGA GACGGAAAGA TTTGCTGATT GAAATGGGAT TCAGATCTCC 
    GAGGCTTTAC TAGTTCGCTG CTCTTTGTCG TAGTATCGAA GCACCTTCCA 
    CCAGCAGAGA AAGCGAAGGT GGTTTCATGT TTCTTTCTTT TTTTTTTTAN 
    CTGTAAANCA ANACCNAAAN TNGTAAAANC TGGTANAGGT AAAAANCAAA 
    NCTGTAAAGN GAAAAAAAGT TCCCGATNGT TNTTTANCTN TTTTCNTCCA 
    AAATTNTCCC CANGGTCCTN TAAAAAAATN CNCANAAATA GTTTNTANCT 
    NGATTCAATN CTAATTTAGT ANTTTNCNAC AAAAAAAAAA AAANNNTTTT 
    TTTTTNNCCC CCNGNTTTTN AAAAAAAANN NTTNNNTTTT GNNTNCCCCN 
    TNNNNCCCCC CNTNGGAAAA AAANNNNAAA AAAANNNTNC CNNNNNCCCC 
    NAAANTTTTT GGGGGGGGTT TTTNCCCAAT TNCCCANCCC CTTTTNNCCN 
    NANTTTTTTN NTTTAAAAAA NTNNNNAATT TCNCCCANNC CCGGNTTTTT 
    TNGNAANCCC CTTAAAAACC CTTTTTTTAA AAAAANAAAT TTNNTTTTNT 
    TGGCAAAANN NAAAAAAAAN TNCCGGNNAA AAAAAAACCC NTTTTNAAAN 
    TTGNGGANCC AAN

AT1G26810.1

Model type
Protein coding
Short Description
galactosyltransferase1
Curator Summary
Encodes a protein with β1,3-galactosyltransferase activity involved in the biosynthesis of the Lewis a epitope of certain glycoproteins.
Computational Description
galactosyltransferase1 (GALT1); CONTAINS InterPro DOMAIN/s: Galectin, carbohydrate recognition domain (InterPro:IPR001079), Glycosyl transferase, family 31 (InterPro:IPR002659), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Concanavalin A-like lectin/glucanase (InterPro:IPR008985); BEST Arabidopsis thaliana protein match is: Galactosyltransferase family protein (TAIR:AT3G06440.1); Has 2303 Blast hits to 2268 proteins in 112 species: Archae - 0; Bacteria - 4; Metazoa - 1677; Fungi - 5; Plants - 568; Viruses - 0; Other Eukaryotes - 49 (source: NCBI BLink).
Link
InterPro Scan - TAIR