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54-4034-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 4886660 [Map]; Strand: w
      • AT3G14550.1 - [+] show detail - geranylgeranyl pyrophosphate synthase 3
        Distance: -678; Region: promoter
    Flanking Genome Sequence: 54-4034-1 - 3-prime edge 
    TTGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCT 
    GTTAGCTAAA TAAGGACAAT ATCAACTGTA CCGTTATAGT ATCTGTGTTT 
    GTCAGCAGTG GAGAGCATGA GGAGGCGCTT CGTTGGTTTA ATAAGATGTA 
    TGCTTTAGGA AAAAAGTTTC ATCCAAAGCT CTGTGCTCTC AGTAGTGTGT 
    GTTTGTCACA ACATCTGCTT TGGCTGCATT GATCTAACTT CTATGAACTG 
    CAGAATTGTG AAGATGAGCA TGGCGTGTAA CTTGTTAGTT CAAAATTCAC 
    TTACATATTC TCCTAGAACA AATCGATTAT GAACTGTAAG TACTTAATTA 
    ATTCTCTGTA TTTCACTTAC TCTGATCAAG TGGCATAAAC GTTAAGACAA 
    TCATTATGTT CTAGGATCGG ACTTCACAAA TTGGGGTACT TGATTTTCTC 
    TACTTGTGAT GTCAATCTTT TTATTAGAAT TTCCTCCTAT CACTACTTAA 
    ACGAAATCTG ATTTGCATTC AATTATTCTA ATCATTATTT TAAACTTCTT 
    ACTTTGTTAA AGTATGTACA TAGATTGTTT ACTTTTTCAT CCCATAATTG 
    AAAAATATTC ATACTATATT GTTTGCAGAA ATTACAATTC AAAATAACAG 
    TGAAGCTGAA GATGTTGACC CTCATTGCTT CCAACTACAA GAAACCTATT 
    AAGAAGAAAG AAAAACCTAT TAAGAGCTCC ACATTTATNA AGTTCTATTA 
    NAGACNGTGG ATAGGCCATG GCTAC

AT3G14550.1

Model type
Protein coding
Short Description
geranylgeranyl pyrophosphate synthase 3
Curator Summary
Encodes a protein with geranylgeranyl pyrophosphate synthase activity involved in isoprenoid biosynthesis. The enzyme appears to be targeted to the chloroplast in epidermal cells and guard cells of leaves, and in etioplasts in roots.
Computational Description
geranylgeranyl pyrophosphate synthase 3 (GGPS3); CONTAINS InterPro DOMAIN/s: Polyprenyl synthetase-related (InterPro:IPR017446), Terpenoid synthase (InterPro:IPR008949), Polyprenyl synthetase (InterPro:IPR000092); BEST Arabidopsis thaliana protein match is: Terpenoid synthases superfamily protein (TAIR:AT3G14530.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR