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54-4037-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 4654948 [Map]; Strand: c
      • AT3G14050.1 - [+] show detail - RELA/SPOT homolog 2
        Distance: -1034; Region: intergenic
      • AT3G14060.1 - [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein ...
        Distance: 2098; Region: intergenic
    Flanking Genome Sequence: 54-4037-1 - 5-prime edge 
    GGATCAAGTG ATTCAAGTTG ACGCTGATAC AGATGGCATG ACTCAGCTGC 
    CGTTGACACT GTGCTATAAG CCTATCTTCA TTTAAAAAAA AAAAAAAANC 
    CCCNGGGGGN NANGNAAAAN CCNAAAAAAA NTNNGNTNAN TNNAAAACCT 
    NNNAAAAANA AAANGGGGGG GGNNNTNNNN CTTGGGGGGN AACCTAAAAA 
    AANCNTTNGG AANAAANNGG GNTNNCAAAT TTTTTTTTGN AANCNGGAAN 
    AAAATTTTAA AANGNGGGNG GGNANTTTNA NNNNTNTNCN TNGGGTAAAA 
    AAANNANTNC CTNNTGGGNN NCCCCNTTGG GGGNAANTTT TTTTNAAAAN 
    CCAAAANTTT NATTTNNNNN AAAAANCCCC CNGNCCAANT TTTTAAATTT 
    NNNAAAANNT TTTTNGNNTT NGGGTTTNNC AANGNNNGNN AAANTNNCNT 
    NNAAAANTTT CCNAAAAAAA AANTNAAATT NNNNNNGGGG CGGGGNACCC 
    CCCGCCCNCC G

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 4655022 [Map]; Strand: c
      • AT3G14050.1 - [+] show detail - RELA/SPOT homolog 2
        Distance: -1108; Region: intergenic
      • AT3G14060.1 - [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein ...
        Distance: 2024; Region: intergenic
    Flanking Genome Sequence: 54-4037-1 - 3-prime edge 
    TTGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCC 
    ACTTTTAACT ATTCTCAATA TGGATTATGG CGACTGTTTA CCAAAAAAAA 
    ATCTCTTTAT TACTATTTAA CATAGTTGTT TTACTTTTTG GCAAATGGAA 
    TTTGTTACTT CAAACATGAA CAAAATATCA GCAAATTGTA CAAAAAGGGT 
    CCACCATGAG ATTTATGTTT GTCTACAACT TTTCTTTTCT ACTTTCTATC 
    GTTTTATTTC GTTTATTTCG CGAGGTCTCG TCATTGGATA TTTTTTGCAT 
    CAATAAGAGG AATCTGAATC GAACCCACAT TGCTGGCTTG GTTAATAACT 
    CTTCGAAGCC GTCTACTCAA ATAGTATTAG CTTGATGATA CTAATAAAGG 
    GTGATAAAGT TTATATCTAC AAAGGTAAAT ATAAATCTAT TTATAAATAG 
    CATGGAATCG ATATGCAATT TGAGACTCGG TTGATTACTA GATTATTCAA 
    CAGAAAAAAA GAAAACTACA TGTATAGTGA AATCAATTCC TTCAAATGGA 
    ACTAACACAG TCAAACATGA TTGGTTTATT GAGGAAAAAA AAANATGGAT 
    GGTTAATGAT ATCAAGGCAA GGGCAACAGN GACATTTTGA TGCATTNGAT 
    GTTGGATTCA TAAAACCCTT CAAATATATT GTAAGTTAAT ATGCCCGATA 
    GTCTAAAANA TAGGAAGGGG AGTGTTGATA AGGACACACC GACNCGTTCC 
    GGANAAAAAC T

AT3G14050.1

Model type
Protein coding
Short Description
RELA/SPOT homolog 2
Computational Description
RELA/SPOT homolog 2 (RSH2); CONTAINS InterPro DOMAIN/s: Metal-dependent phosphohydrolase, HD subdomain (InterPro:IPR006674), Metal-dependent phosphohydrolase, HD domain (InterPro:IPR003607), RelA/SpoT (InterPro:IPR007685); BEST Arabidopsis thaliana protein match is: RELA/SPOT homolog 3 (TAIR:AT1G54130.1); Has 12447 Blast hits to 12322 proteins in 2456 species: Archae - 4; Bacteria - 8610; Metazoa - 164; Fungi - 55; Plants - 218; Viruses - 2; Other Eukaryotes - 3394 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G14060.1

Model type
Protein coding
Computational Description
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G54120.1); Has 30 Blast hits to 30 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 30; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR