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54-4132-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 2759653 [Map]; Strand: w
      • AT3G09035.1 - [+] show detail - Concanavalin A-like lectin family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 54-4132-1 - 5-prime edge 
    CTNGAAAAAC TAACAAAATC GGTTATACGA TAACGGTCGG TACGGGATTT 
    TCCCATCCTA CTTTCATCCT TCAAGTTCTA AGAGAATGAT GGTTCGATTC 
    AGAAAATCTG GTTCGGTAAA GCTGTTTGAT CCGTTCTTCT CTTTCTCGGT 
    AGACTTGGCC AAGTTATGGA AAGGTGGTGA AGTCACCTGT GGGTTTAAGC 
    TCTGCCAATG GGAACTCTTC TTCCAAGGCA CATTTTCTCC ATTCATGGAG 
    ATTTGAAATA AGACATCCTC CTCCGATGTG GATGCATTCA GTGCCGCTTG 
    AACCGAATGA AGTTTCAAAG GAGGAGGAAA ATGGTCGAGG GAGAAGTGAG 
    TGTACGCGGA AAATGCTNGG TGCTTTGANC TTNGGTGCAG CTGGTGGAGC 
    CTTATGGGCA CTGCTGGGTT NGNATCTNTG GACGATATGC CGNGTTAGGC 
    GGNCAAAAGN CCGNGGNTNC ANAGGNNTGN NCCNNTNCGA GCNANGCAAA 
    NAAANTATTG NGTNNTNAGG GGGGAAGNAA AAAAANANTT NGNNTTGTGG 
    NNGGGGNNAA AAAAAAAANN TTTNNNTTNT NGNNNNNANN NNNAGGGNNG 
    NGNNNNNNGN TNNTNNNNNC NGNNNNNNNG NCNNNGGNNN CNAANNGGGN 
    ANNTNNNNNN GNNNANTNNN NNGNNGGGGG NGGGGNNNGN GNNNCGNNNN 
    NNGNANNANN NANNNNNNNA NNGANAAAA

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 2759640 [Map]; Strand: w
      • AT3G09035.1 - [+] show detail - Concanavalin A-like lectin family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 54-4132-1 - 3-prime edge 
    ANTTGAAAAC GGTAGAGGTA TTTTACCGAC CGTTACCGAC CGTTTTCATC 
    CCTCATACAG CTCAGAGTCC TTCCATTGTC CATCATCAAG TCACCCACAA 
    ACGAAAGGTT TCTAATTTCA GCAGATTCAG GTCTACCAAC TAAAATTCTT 
    GCACTGTTTC CTGTCCTGGA GATACCAAAC TCGACAGCAA CAACTGTCTC 
    GTTCTTTGCA TATTGTGATA AAAAACCTAA AGCAGAGGAA CTGTTGTCCT 
    TCTTACCAAA CAGACTAAGA TCCAAACTAG ATGGAACCAT TACAAAAGCC 
    AAGACATCAT CACCAATCTC GTTGGACATG GAAGAAAACG AGAAGTGAGT 
    AGAGAAAGAT CTCGAATT

AT3G09035.1

Model type
Protein coding
Short Description
Concanavalin A-like lectin family protein
Computational Description
Concanavalin A-like lectin family protein; FUNCTIONS IN: carbohydrate binding, binding; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Legume lectin, beta chain (InterPro:IPR001220), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Concanavalin A-like lectin/glucanase (InterPro:IPR008985); BEST Arabidopsis thaliana protein match is: Concanavalin A-like lectin family protein (TAIR:AT3G09190.1); Has 816 Blast hits to 814 proteins in 61 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 813; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink).
Link
InterPro Scan - TAIR