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54-4183-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 26463070 [Map]; Strand: w
      • AT5G66230.2 - [+] show detail - Chalcone-flavanone isomerase family protein
        Distance: 0; Region: exon6 (CDS)
      • AT5G66230.1 - [+] show detail - Chalcone-flavanone isomerase family protein
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: 54-4183-1 - 5-prime edge 
    CTCAGGAGTT GTTGGGAAGA GGAACATGAG CAGAATCAAT AACACTCCTG 
    GATCTGGTGA GGCTCTCTTG AGAGGCCAAG TCAAGACTCT CTTGCAGAAG 
    GTTGAGGAAG AAGCAGATCT CACCAAGATT TCGTTGGAAT CTCGTCCTTT 
    CATCCATCTC GTTACTTCTC CCATGGGTCT TCTCGCCCCA ACTCCGGCCA 
    ACACCCCCCA AGTTCTTGGT TTCTCAGACG AAGTGCAGGT TGTGATCACT 
    TCTCCGGTAG TTGCAGGACA ATTCAGAGCA CCGTCTCAGG TAAAACTAGA 
    TTTGTATATG TTTTTTGCTG ATAGATGGAA GATTCTTGGG GAATGATAAG 
    AAGATGTTAA CTTGGTTTTT ATTCTTGCAG GTGGTGGAAA GCAACATGTT 
    TGATGAGAAA GAAGAAAGCT

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 26462954 [Map]; Strand: w
      • AT5G66230.2 - [+] show detail - Chalcone-flavanone isomerase family protein
        Distance: 0; Region: exon6 (CDS)
      • AT5G66230.1 - [+] show detail - Chalcone-flavanone isomerase family protein
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: 54-4183-1 - 3-prime edge 
    CTCCTGAGGA CGGTGTCTGC ATCGCCAGAC CTACGATCGG TGAGTCGTTG 
    GTTATGTCAA ACAACGCAGA CCTGTCTTTT GCACCGTTTC TTTGTACCGA 
    CTTCGATTGA CATTTATCTG ACCAATCATC CGCTTTCTCT GTAGGAGATA 
    AATTATAAAC GATCAGATCC AGAAACAATA GTCCGACTCA ATAAACAAAA 
    TCANGGAATC GGACTATGGA NACTTACTTG AGGATNAGAN ANTATTGNTA 
    GCAGAGCGGG NCTNAGANTA ACAANCCGGG NCGGNGANCN NCCCTGGNCT 
    TTNGNGNANN NNNNNA

AT5G66230.1

Model type
Protein coding
Short Description
Chalcone-flavanone isomerase family protein
Computational Description
Chalcone-flavanone isomerase family protein; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 8 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G51230.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G66230.2

Model type
Protein coding
Short Description
Chalcone-flavanone isomerase family protein
Computational Description
Chalcone-flavanone isomerase family protein; FUNCTIONS IN: chalcone isomerase activity, intramolecular lyase activity; INVOLVED IN: cellular amino acid derivative biosynthetic process, flavonoid biosynthetic process; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Chalcone isomerase, subgroup (InterPro:IPR003466), Chalcone isomerase, 3-layer sandwich (InterPro:IPR016088), Chalcone isomerase (InterPro:IPR016087); BEST Arabidopsis thaliana protein match is: Chalcone-flavanone isomerase family protein (TAIR:AT5G66220.1).
Link
InterPro Scan - TAIR