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54-4200-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 176429 [Map]; Strand: c
      • AT4G00400.1 - [+] show detail - glycerol-3-phosphate acyltransferase 8
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 54-4200-1 - 5-prime edge 
    CAGATCCTCA TCTTCATCTC ATTCGCTGGT CTCAAAATCC GCGATATCGA 
    ACTTGTCTCT CGCGCAGTTC TTCCACGGTA CGAGATCTAA CATAGAGTGT 
    TTTCTTGTTA GTAGATCACN TTTAGTTTTT TTCTGATGAA CNTTTGTTTA 
    GGTTTTACGC GGCGGATGTG AGGAAAGACA GTTTTGAGTT GTTTGATAAG 
    TGTAAGAGAA AAGTGGTAGT GACGGCGAAT CCGATTGTGA TGGTGGAGGC 
    GTTTGTGAAG GATTATCTTG GAGGTGATAA AGTTTTGGGA ACAGAGATTG 
    AAGTTAACCC TAAAACCAAT AGAGCCACTG GATTTGTGAA GAAGCCTGGT 
    GTTCTTGTTG GTGATCTTAA GAGGTTAGCC ATTTTAAAAG AGTTTGGTAA 
    CGAATCACCT GATCTCGGCC TCGGTGATCG AACCTCTGAT CATGATTTCA 
    TGTCTCTCTG CAAGGTACTG TTCCAATCTT TTTATCCAAT CTTGGTCGAT 
    TATAGGGTAA AGTTAAGTTG AATTATTGAG TGTTGATTGG TTTAGTGTAA 
    GATGTGTTTT GGAGGTAACT TGAGAATCTA AGCAAACGTT TGATTTGCTT 
    GTTGATTAAG CTAGATAATC TAATTTAACT TGTTGACTGG TTTAGTGTCA 
    TTATGTCTAC GCGTGAATCT TATAAAAATA ATGAAATTTT TGATTTGGGA 
    AGCAATTAGT AAGGGTCATA N

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 176545 [Map]; Strand: c
      • AT4G00400.1 - [+] show detail - glycerol-3-phosphate acyltransferase 8
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 54-4200-1 - 3-prime edge 
    AGGATCTGGA TACCAAGAGA TTCGGATACG AATAGGTAAG AGATAATGAC 
    GAATGGTAAC GAGAGAAGGA GGATTAGTCC ACGTAAAAGG CTTCCAGCTT 
    CAACAGCGAC GAGCATGAAG TAAGGGAAGG AGCNTTCTTG AGAGAAGCAG 
    AGTCCCGTCA AGATCGGCGG CTATCGAATC GTACTCTCCG TCTCTGCATT 
    CCGTTATTGG AGGGAAGTTT TGACTCTTCT TCTCCGGAGA CATTTTCACT 
    CGCCGTGTGT GTGTGTCTCT CTCTCACTCT CGTTAATGGC AGTTCTAAAG 
    AACAGAGAGC AAAAATAAGA AGACAAGAGA GGGAACGTTA TGTTTTAAAT 
    GCACCTATAT TGAAGACCGT AATATTAATT CAGTGGGTTA TATCTATAAT 
    CTATATCTAT GTGAATGAAT ATGATATATA TATATATATA TGTATATGTC 
    ATTNNCTATG ANATATCCNC TAAGAGCGTA GAGTGTGGGG CCACATGTAN 
    AATTACCAGC CNGGNCGNAN ACCCCGTGNN NNCNNTTAAA

AT4G00400.1

Model type
Protein coding
Short Description
glycerol-3-phosphate acyltransferase 8
Curator Summary
Involved in cutin assembly. Is functionally redundant with GPAT4.
Computational Description
glycerol-3-phosphate acyltransferase 8 (GPAT8); FUNCTIONS IN: glycerol-3-phosphate O-acyltransferase activity, acyltransferase activity; INVOLVED IN: metabolic process, cutin biosynthetic process; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phospholipid/glycerol acyltransferase (InterPro:IPR002123); BEST Arabidopsis thaliana protein match is: glycerol-3-phosphate acyltransferase 4 (TAIR:AT1G01610.1); Has 380 Blast hits to 369 proteins in 27 species: Archae - 0; Bacteria - 6; Metazoa - 8; Fungi - 0; Plants - 360; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink).
Link
InterPro Scan - TAIR