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Mutant Lines
54-4213-1

54-4213-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence
1. Chromosome: 2; Position: 8856051 [Map]; Strand: w
  - AT2G20570.1 - [+] show detail - GBF's pro-rich region-interacting factor 1
    Distance: 0; Region: intron1 (CDS)
  - AT2G20570.2 - [+] show detail - GBF's pro-rich region-interacting factor 1
    Distance: 0; Region: exon2 (CDS)
Flanking Genome Sequence: 54-4213-1 - 5-prime edge
```
TAAAACATTA GTCTTATATG AATAAAAACC CTAGCTAGAC TCGATTAAAT 
GAACAGGTCT ATAATGGATT CGTATTTTTT TTAAAAGTGG ATTATTCGTT 
TAGAATT
```

3 prime edge [+] show sequence

Chromosome: 2; Position: 8855935 [Map]; Strand: w
- AT2G20570.1 - [+] show detail - GBF's pro-rich region-interacting factor 1
  Distance: 0; Region: exon1 (CDS)
- AT2G20570.2 - [+] show detail - GBF's pro-rich region-interacting factor 1
  Distance: 0; Region: exon1 (CDS)

ATGTTTTATA TATAGATGAT ATGATTAAAA TCATTACCTT CACCTTTCTC 
TTCCCTTCGT TGTTACTGAT CCGATTGTTC TTGGAAGAAG CTGAAGAGGA 
ATACTTCCTT TTCCGGTCAC TGTCACCGTC ATAAGTCACC GTCTCCGCCG 
CAACATCGTC TCTTTTGCTT ACGACTTCTT CACCTTTCCC CGAACTACCC 
TTAGTAGTCT CCCCTTGACT ATCAGTCTTA TCCGACGTCG TAGTAATCGT 
TGAAGAAGCG TTCATGTGAT CGGAGAAATC CCCGGATAAN ANA

AT2G20570.1

Model type: Protein coding
Short Description: GBF's pro-rich region-interacting factor 1
Curator Summary: Encodes GLK1, Golden2-like 1, one of a pair of partially redundant nuclear transcription factors that regulate chloroplast development in a cell-autonomous manner. GLK2, Golden2-like 2, is encoded by At5g44190. GLK1 and GLK2 regulate the expression of the photosynthetic apparatus.
Computational Description: GBF's pro-rich region-interacting factor 1 (GPRI1); CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: GOLDEN2-like 2 (TAIR:AT5G44190.1); Has 2420 Blast hits to 2125 proteins in 147 species: Archae - 0; Bacteria - 17; Metazoa - 163; Fungi - 64; Plants - 2094; Viruses - 12; Other Eukaryotes - 70 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT2G20570.2

Model type: Protein coding
Short Description: GBF's pro-rich region-interacting factor 1
Curator Summary: Encodes GLK1, Golden2-like 1, one of a pair of partially redundant nuclear transcription factors that regulate chloroplast development in a cell-autonomous manner. GLK2, Golden2-like 2, is encoded by At5g44190. GLK1 and GLK2 regulate the expression of the photosynthetic apparatus.
Computational Description: GBF's pro-rich region-interacting factor 1 (GPRI1); CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: GOLDEN2-like 2 (TAIR:AT5G44190.1).
Link: InterPro Scan - TAIR