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54-4267-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 26454559 [Map]; Strand: c
      • AT5G66200.1 - [+] show detail - armadillo repeat only 2
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 54-4267-1 - 5-prime edge
    GTCTTGATGA GGATCAGAGC TCTATTCCTC ATCCTACAGG GAAGCAAATG 
    CCCAATCAGA TGCACAATGT GGTCGTCAAC ACCATGGCGG TTAGGGCAAA
    CCCTCCGAGG AAGTCGACTA GCAACGGTGT GAGCCAGAGT AATGGTGTGA
    AGCAACCTAG CAGTCTACAG CAGCACCAGA ATT
  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 26454675 [Map]; Strand: c
      • AT5G66200.1 - [+] show detail - armadillo repeat only 2
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 54-4267-1 - 3-prime edge
    ATCAAGACCC TTGGGCAAGG CGGTGGCGGA GGTGGAATTA GGATTTTCCT 
    TGGCGAGAGC GACGGCGTGG TGAATGGAAG TAGCTTTGTT GTTGGTGGCA
    ATGGCNGTAT TTGCTGTGCT CTTGCACAGT TTCGAAGGCC AAGTGGCCAA
    CGAGTAGCCG AATGGCGTTG TGCTGAGCGA AGACGTCTTG GCACTTGGGG
    TGATTGGACA CAAGCTCCGA CGTAGCCCAC GCAACCACCG CCTGGACTTT
    CATAGGCCCT TCTTTGAGGA CTTTGCCGAA GACGGAACAA GCGCCGCCGT
    GAATCATGTG CTCCACGCTC TCAGGATCAC GTCCCAGTAA CCCTAACGCA
    CGCGCTGCGT TCTCTTGCCC CTCGGGCTTC CCTTCCTTGA GCAGTTTAAG
    GAGAGGCACC ACACCTCCTT CCTCTATGAT AAGCT

AT5G66200.1

Model type
Protein coding
Short Description
armadillo repeat only 2
Curator Summary
Armadillo repeat protein. One of a family of four in Arabidopsis. Expressed in vegetative tissues, anthers and ovules.
Computational Description
armadillo repeat only 2 (ARO2); FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: armadillo repeat only 1 (TAIR:AT4G34940.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR