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54-4349-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 26811184 [Map]; Strand: w
      • AT5G67190.1 - [+] show detail - DREB and EAR motif protein 2
        Distance: -1495; Region: intergenic
      • AT5G67200.1 - [+] show detail - Leucine-rich repeat protein kinase family protein
        Distance: 2541; Region: intergenic
    Flanking Genome Sequence: 54-4349-1 - 5-prime edge 
    GGTAGGTCGG TGGTCGGTGG CTGGGATATA CCGTTAGGAA TTGACTTTAT 
    GTGTACTCAA ATTACGACAC AGTCTTGTGT TTTGTCCTTT TTGTCCCTTT 
    GATTCCATTC CCCCTCCCGT TTTGTTCACN TTTTGTCCTC TTTCCCATTT 
    TTCTTCTCTT GTCCTCTCTC ATTTTTATTC TCAGGGAGAA TTTCGGTATA 
    ATGTATCCCT TTTTTTTTTT TTTTTTTTTT TTTTTTTTTT NNNAAANNCC 
    CCNTTTTNNN AAAAAAAAAA AAAAAAAACN CCCNNNAAAA AAAAANNNNA 
    AAAAANNNNN NNTTTTNTNN NNAAAAAAAA ANNNNNAANN NCCCCCNNNT 
    TTTTNAAAAA AAAAANNNNG GGNNTTTNNA ANNCCCNNNN AAAAAANNTT 
    TTNCNNNNGG GGGNNAAAAA AAAANNNGGG GGGGGGGGGG GGNCCCCCCC 
    CCCCGNNNAN NGGGNNNNNN NCNNNNGGGG GGAAAAAAAA AAAAAAANGG 
    GNNNNANNNN GNAAAAAAAA NCCCCCNAAN NNNCCCCAAA AAAAAAAACT 
    NNNNCNNNCN CCCCNNAAAA NAAAAAAANN NCCCNGGNNG GGGGNGAAAA 
    ANNTTNNNNN CCCCNTTTGG GGNANNNAAN ANNAAAAAAA TTTTTTAAAA 
    AAAAAAAAAN ACCCNNNNCN NNNAAAAAAN NNCNCCNCCC CCCNAAAAAA 
    AAAAANAN

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 26811068 [Map]; Strand: w
      • AT5G67190.1 - [+] show detail - DREB and EAR motif protein 2
        Distance: -1379; Region: intergenic
      • AT5G67200.1 - [+] show detail - Leucine-rich repeat protein kinase family protein
        Distance: 2657; Region: intergenic
    Flanking Genome Sequence: 54-4349-1 - 3-prime edge 
    GACCTACCTT TCTTCCTCCA CTAATCCTAT AGTACCGTAT AATGACGTAT 
    GTCCCGTNTT CCGTAATAGT ACCCTANTTA AATAGAACCA GTTAAAGTAA 
    TTTTCCATTA TAGTNTAGTT AAATTTCATT GTGAAAAAAA AATATTTTTT 
    TATATATAGT TAAATTTCAT TCCATATTTC GTCAACTAAT CTCTAATATA 
    ACAGCGATGA AATAATTTTN TGTTTCTAAA CTTAAACTGT NCAAAAGAAA 
    GGTCNCGGAA AAAAATACTT TTACAAAACT NATGACGNGG GTGAAGATAN 
    CTAACATAGG AATATATAAT TCTATATTAT NAAATNGNTC ATACAACCAT 
    TCGNNGTGTT TTTATATGAT GCTAAAAAAT CAANTTGTGT NTTTCAANTG 
    NNGAAGNNAC GGATAAAAAA AAANCCTATA TNTGTNTATA TATATGTATA 
    NAAAANGACC CGCGGGGNCN NNTCCCCCCG CNNGCNNTAA ATNGTTNCTC 
    CGCTGTNCTG TTTCNGNGTG NNGNGGGNNT NCNCNCGNGG NNGGGGNGGN 
    GNNNGGTTGC GNGTGCGGNG TACNCNNNNG NGGTGTNNCN TGTNGCCGGC 
    NCNNGTCGNG CNNNTTGNNT TCCCCTGCNG TGGCTTCTNG NACNNNGGGG 
    TTGCGNGTGG NCNNTCTNTA NAGAGCAGTN GNTGTNGNAN GNNTTCGGNN 
    GGNGNCGNNN GNGNGNNGNT TGNTCTNNAN AGGTAAAAAA AANAAAAAAA 
    AAAAA

AT5G67190.1

Model type
Protein coding
Short Description
DREB and EAR motif protein 2
Curator Summary
encodes a member of the DREB subfamily A-5 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 16 members in this subfamily including RAP2.1, RAP2.9 and RAP2.10.
Computational Description
DREB and EAR motif protein 2 (DEAR2); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: sepal, male gametophyte, carpel; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: cooperatively regulated by ethylene and jasmonate 1 (TAIR:AT3G50260.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G67200.1

Model type
Protein coding
Short Description
Leucine-rich repeat protein kinase family protein
Computational Description
Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT3G50230.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR