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54-4363-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 18663740 [Map]; Strand: w
      • AT2G45250.2 - [+] show detail - Integral membrane protein hemolysin-III homolog
        Distance: 711; Region: intergenic
      • AT2G45260.1 - [+] show detail - Plant protein of unknown function (DUF641)
        Distance: 790; Region: intergenic
    Flanking Genome Sequence: 54-4363-1 - 5-prime edge 
    GGGAAAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATCCAC TACTTCACAC AACTTCGAAG AGAAATCAAC 
    TCGAAATAGC CAAGAGAATG TTCGAAAACC CCCTCAAATC CGATGCTTCC 
    TTTGATTCCA ACCTCCAAAA GCCCATCTGC TCAAATCTCC ATTTCGAGGA 
    CGAGGACTCG AGGAGTATTA CAAGGTACCT CTATAGAATC AATGGCTTCA 
    ATGGATTTTG AAACTTTACT TCTAATAAAC ACCATTGTAA TGTTTTGTTG 
    TGAAATTGTG TAAGGAACAA AGGATAGTGA AAGCTGAAGA GTGGGATTCG 
    TTTATGGAGT TTCAGAGTAA GCCATTACCT TTCAGAGTTT TTTTGCTTAT 
    TTTAGAATGC AAATGACGTT GCTTCTAAAT ATTATTTCTT CTCAATCATT 
    CATGCTCTGT TTTCCTCTCT TCTTAGGCTC TGTTTTGGTT TTTAATTAGT 
    GCACTGTTAT GTTGCATATA CATATACCAT CGCCTTAGTG TAGCATATAG 
    TAGATGATAA AAGATATTAT AAAATGTGAA TATACAACAA TTTGCGAAGT 
    ATAAAAAACA AACATATTTA TGCACATCAA TAAAAATTCA GAAATCAATA 
    AAAATTCACT CTGAAAACAC AGAAAATTCA TAAGTGTTTA TTATTCTTTT 
    CAATATATGA GAGGAGGAGC TCCCCTACTA TTTTTATTTT TTTAGCCAN

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 18663742 [Map]; Strand: w
      • AT2G45250.2 - [+] show detail - Integral membrane protein hemolysin-III homolog
        Distance: 713; Region: intergenic
      • AT2G45260.1 - [+] show detail - Plant protein of unknown function (DUF641)
        Distance: 788; Region: intergenic
    Flanking Genome Sequence: 54-4363-1 - 3-prime edge 
    GAAAACGGTA GAGGTATTTT ACCGACCGTT ACCGACCGTT TTCATCCCTT 
    CGTCTCCATT TTTGTTGTTA CAGTGGCCGA GCTTTTTGTT TTCACAGTTT 
    TTATGGGTTT ACATTGGTTT TGAAATTCAA ATTGATCTCG GTTCGGTTTA 
    CTTTGGTTTA GAGAAGAAAA CCAAAAAAAA TAAGACACGC TGATGGGTTT 
    TTGAGAATGA GGTGCGTGGA TC

AT2G45250.2

Model type
Protein coding
Short Description
Integral membrane protein hemolysin-III homolog
Computational Description
Integral membrane protein hemolysin-III homolog; CONTAINS InterPro DOMAIN/s: Hly-III related (InterPro:IPR004254); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G38280.1); Has 122 Blast hits to 120 proteins in 32 species: Archae - 0; Bacteria - 8; Metazoa - 5; Fungi - 9; Plants - 83; Viruses - 4; Other Eukaryotes - 13 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G45260.1

Model type
Protein coding
Short Description
Plant protein of unknown function (DUF641)
Computational Description
Plant protein of unknown function (DUF641); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF641, plant (InterPro:IPR006943); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF641) (TAIR:AT4G34080.1); Has 407 Blast hits to 396 proteins in 44 species: Archae - 0; Bacteria - 10; Metazoa - 42; Fungi - 9; Plants - 286; Viruses - 0; Other Eukaryotes - 60 (source: NCBI BLink).
Link
InterPro Scan - TAIR