1. Home
  2. Mutant Lines
  3. 54-4384-1

54-4384-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 12110934 [Map]; Strand: w
      • AT3G30465.1 - [+] show detail - transposable element gene
        Distance: 0; Region: exon1 (NonCoding)
    2. Chromosome: 2; Position: 3068872 [Map]; Strand: c
      • AT2G07395.1 - [+] show detail - transposable element gene
        Distance: 0; Region: exon1 (NonCoding)
    Flanking Genome Sequence: 54-4384-1 - 5-prime edge 
    GTCNTTAANN NAANTAACAT GACTACTTTN ACAGAAAAAT CGNTNGATGG 
    CTGAGTTTGT CTNACGTGGT GGTTGACTTG TCAAACCCAA ACTTCCCTCN 
    CATNAGNTCT NNCTATGACG NCACNTTTAG GACNNTTCTT ACACCTGCTG 
    TNNGACCCCT NGCNCTTCAT TTCCTTCNNA TTTCGTCCNA ATCAGGGGCC 
    ANGNGAAGGN CNTCGGTCCN NNCTNNTTCA TNGNTAGNCG AATTATTTAA 
    ATTAAGGATA CNGTGGAACC GTTGGTCGAA TGCTGCGGAG CAATGGAGCN 
    NTTCTGAACA CCTGGCTAGG NNNATNACCT CGTNTTGNGC TTCGACGNNG 
    NNNTTNNGNT GGGCATCGNN CATNTANTAC CAACNAATCT TCNCAAAGAA 
    ATTTGGNNAN GANNGAAAAA GACGGGGGNA GANATTANCN ANNNCCCNCT 
    NNNNGCNCCC ACCCTGGTGG GGGANGGAAG NCNCCANNAG TCNNCTNAAG 
    NAAGGGTTTN TTNTTTCTCN CAACNNCNNC CCNNCCCTTT TGGCCTCNCC 
    NNNGGAAGGN TTTTTNGNGN GGGGNAAANT TAAAATTNCC CCCCCCNACN 
    NNTTNAATNC CTGCGNAAAA NAANNAATTN TNTTTTAATT TNTACNNNAA 
    AGTATGNNGN NGNAANGCCC TNNTAATATA ANGCCCAAAT TGGGAAGNAN 
    AGGNGGNATG GNAANGGGNT TTNTTTANTT TTNTCNNANN TNGANANNNG 
    GNTNCNNCTT TTGAGACATN NTNAANNNCC TNNGNGNNGT TGNANNNGGN 
    NNNGNGGGCC CGNNGNNTNG GGANANNTCA NNGANAAACN NNNAGCCGNA 
    ANANANCAAA NAAAAAANGA AAAAAAAAAA AA

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 26699020 [Map]; Strand: w
      • AT5G66850.1 - [+] show detail - mitogen-activated protein kinase kinase kinase 5
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 54-4384-1 - 3-prime edge 
    AAAAAAAAAG NNNNNNNNNN NNNNNNANNN GNNNNNNNNA AAAAAAAAAT 
    NAAAAAAAAG GNCCCNTANA GGAAACAGAG NAAAATTTTG GCCGGGCCCA 
    ACCGTTNNCA TCCCTANTNG GGAGANCGTC GGGCTTCTAC CTCTTCCTCC 
    CCTTCGANTC CGGCTTAGCT CGCTCTCCCA GCGCTTTCAC CGCCGNNCCT 
    CGCTCTCCTT NNGCCGTTCC CTNACCCTTA CCTCTCCCCT TACCGGAGGT 
    CGCCGGGATT CGAAATGCCN CAAACNCTAG AGGATNGGAT NACTGAGATC 
    GAGATCCCGA GAGACTCATA TCTGGNCGCC CCTCTTCTGG CCCTCCTCNN 
    ANCAGGGGNG NGNNAGTGGG CGGGATATCA ANTGGNGGCC TGNAGANANN 
    NNGGNCNNNC NCCNNNCCGA NTNGGGTTNG GGNGANGGGG GCGNGTCACG 
    CGNNNCNTGG GCGGCNNGGC CCNCNCGNCC GGCCGCCGGT GNNCGCGNGG 
    CGGNNNNCGC GCNGGGGGNG CGGGNGGGGC CGCNCCGCCG NGGGGCGCGC 
    GGGNCNGNCC GNCGAGNANG GGGACGGGGG GNGGNGCNGG GGNCGCGGNG 
    NAGGNNCNGC NAGNGNNNCG CCNNGCGCCG GGNAGNAGGG GGCGNGNGGG 
    NGTGGGGCCN GGACACCANG AGACAACGNC GNGAGAGCGC CGCGGAGGCN 
    NNNCCCCCCG GNACNNGNGC CGCGCGANCC NNCGNNGNAC ACAACAGNCC 
    GGCNNCNCAG GATACAGNAN NGANAACACG GNNGGGNCGC CGNNACGTCC 
    GCGCNGNACG CGNCACNCGC TNNGACCGGG NACGNNGGNC NGGNNGGGAA 
    GNAGAGNNCG GGNNCCNCNG GNNTNNAGCG GGGGCGNCAC NCNAGAACCC 
    CNNNGGCCCN NCGCCGCNNC CGGNCGCTAN AACAAAAGAA AAAAAAAAAA 
    AAAAA

AT2G07395.1

Model type
Transposable element gene
Short Description
transposable element gene
Computational Description
pseudogene, hypothetical protein
Link
InterPro Scan - TAIR

AT3G30465.1

Model type
Transposable element gene
Short Description
transposable element gene
Computational Description
pseudogene, hypothetical protein
Link
InterPro Scan - TAIR

AT5G66850.1

Model type
Protein coding
Short Description
mitogen-activated protein kinase kinase kinase 5
Curator Summary
member of MEKK subfamily
Computational Description
mitogen-activated protein kinase kinase kinase 5 (MAPKKK5); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G63700.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR