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54-4469-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 24212002 [Map]; Strand: c
      • AT5G60130.1 - [+] show detail - AP2/B3-like transcriptional factor family protein
        Distance: 0; Region: exon3 (CDS)
      • AT5G60130.2 - [+] show detail - AP2/B3-like transcriptional factor family protein
        Distance: 0; Region: exon5 (CDS)
    Flanking Genome Sequence: 54-4469-1 - 5-prime edge 
    GGGAAAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATCTGT GTTTGTCAAG GGATTTGGCA GTATCATCAG 
    AAGGAATAAA GTGAAGACAA CGGATAAGAT GATATTTGAG ATCAAGAAGA 
    CTGGTGATAA TAACCTGGTT CAAACAATCA AGATTCACAT TATCAGTGGA 
    TGATTATTTA TATCTCTCTC TCTCTCTCTC TCTCCATCTC TCTGTCTTTA 
    GTNACGTGTT NNGGAGTTAA ATCAAGATTA TTGNGGTGTA TTGAATTAAT 
    GTAAGAGTTT TTAATTTCTA AAACTTATCA NATCTATACA AATTTGTAGT 
    CTCTCAAGTC TCAATAGCTT TCTTCATTCA TACATATAGA ATGCATTGCA 
    CTTNACGCTG TTCATATTAA TATCAGANAC ATTATAGTAA AATGGCAAAT 
    GGGTNTGGGT TCTGTTTTGG TATTATCCCT CAGTTTATGT NACAAATCAA 
    ANGCAGANAG ATAAATCACA CAGTGACAAT AAGNACAACA GATCTTGGGA 
    GAATT

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 24212005 [Map]; Strand: c
      • AT5G60130.1 - [+] show detail - AP2/B3-like transcriptional factor family protein
        Distance: 0; Region: exon3 (CDS)
      • AT5G60130.2 - [+] show detail - AP2/B3-like transcriptional factor family protein
        Distance: 0; Region: exon5 (CDS)
    Flanking Genome Sequence: 54-4469-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCTA 
    CACACTACCA TTTGTCTGAA TCTTGATCTG CTTCTCCAAT GTCCCGAATT 
    TTTTCACAAG TGGATCGACA AGAGTGATAC TCTCAGGGAA GTGCAAGTCA 
    TAGTCTTTGA TAACCCGAGC TGGGATGAGC TGCTTTATGA AAAAAAACAT 
    CATAAAAACT CACAACCCAA CGATGTTAAA TGAAAAGCTC TTTCACATTC 
    AGTTTTTACT TACCAGTTGG CTTTTCTTCT TCGGATTAAG GATCAGAGTA 
    AAAGATGGGT TCTCACGATC ATCCAGATAC TGTCTTTCAT CTTCATCATC 
    ATCATCAGCC TTAGCATGAT CTCTAGAATC AAAAGCCTCA ACATAATCAT 
    CATCTTCAAC AGGAACATCA TCAGCATCAT TATCAACATC TTCATCATCA 
    GCATCATTAT CATCTTTCTC GACAGCAGCT TCATCAGCAT AATCATCACT 
    ATCATTGTCT TCACCACAAT TATAATCAGA ATCGTCATCA TCCTCATCAA 
    GAGATAAAAC ATCATCACTG GCCTGATTTT GTTCATCACT ATCAGATTCC 
    ACTTTGATCT CCTCGCTTTG ATCTGAACTT CTTCTTATCT TTTTACACAT 
    TGTCCTATGC TCATAGATAC AGAAATGGAA ACAACTAGAG CCATCAAACT 
    CAAACTCTAA GAAATCTCCT CCCTTGAGAT CTTCGTCCTT CACAATCCTC 
    TTCCACCCAT

AT5G60130.1

Model type
Protein coding
Short Description
AP2/B3-like transcriptional factor family protein
Computational Description
AP2/B3-like transcriptional factor family protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Transcriptional factor B3 (InterPro:IPR003340); BEST Arabidopsis thaliana protein match is: AP2/B3-like transcriptional factor family protein (TAIR:AT5G60140.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G60130.2

Model type
Protein coding
Short Description
AP2/B3-like transcriptional factor family protein
Computational Description
AP2/B3-like transcriptional factor family protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Transcriptional factor B3 (InterPro:IPR003340); BEST Arabidopsis thaliana protein match is: AP2/B3-like transcriptional factor family protein (TAIR:AT5G60140.1).
Link
InterPro Scan - TAIR