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54-4650-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 9060103 [Map]; Strand: c
      • AT2G21130.1 - [+] show detail - Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein
        Distance: -3871; Region: intergenic
      • AT2G21140.1 - [+] show detail - proline-rich protein 2
        Distance: 522; Region: intergenic
    Flanking Genome Sequence: 54-4650-1 - 5-prime edge 
    TTGAAAAGCA AGTTAAGTTT TGCTCAAAAA CAAAAGAAGA TTAGGGTTTT 
    TGTGTGTAAA ATTGCGGATT CTTTAAATAG AAAACAAATC TTTTTATTTA 
    TACTCAAAAG AGGCATTTAA GATAAACCAA ATTTTTGTTA GCGAATATGT 
    GTGTGTTTTT GTTAACGAGT AAGGCATATT CGACCAAACA CATCGTAAAT 
    CTTATTTCTA CGTATTTTTT CCAAAAGATG GCTCACATTT CTGCTTGTGT 
    AATAGTTTTC ATTATGTAGT CTTGTATAAC TTTAACACTT TAACTTCAAT 
    ATAATGGAAT GATTTTAGAA GGAAAAAAAA CAAAAGAATA TAAACTCAAT 
    TTCCTTAAAT ATAGGGTTTG AATCTCCAAG TTACCTTTAT CTTCAAACCT 
    TGTCATTATC TTATAAGAAA TTTCTTATGA TTTCTCTTTT TGGAAAGTCG 
    GCGTTTCCTT TTCTTTTTTT GTGGGAAGTC GACTGGCAAC TTATATGGGC 
    TTTTTTCAAG GCTATTAANA GGTAAATCGG GATTCCCTGA TTTAATTGAA 
    GGAATTGNGA CACNTTTAAN CNCTTTNNGN TAATATTATT CTTTTNGANA 
    CNCTTATGAN ANAGNGAACA CTTTGCCNTC TTTTTNAAAN AAAATNGGAC 
    CNNTTTATCC CNTANNGNNN NGNTNCNCNN NNNTNNNANC NNNTAANGNN 
    GAAAA

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 9060219 [Map]; Strand: c
      • AT2G21130.1 - [+] show detail - Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein
        Distance: -3987; Region: intergenic
      • AT2G21140.1 - [+] show detail - proline-rich protein 2
        Distance: 406; Region: intergenic
    Flanking Genome Sequence: 54-4650-1 - 3-prime edge 
    CTTTTCAAGA TGACTTCCGT TGCGGAAAAA TAATCAGGAG AGATGCATGG 
    CAGCTCGCTA GTTGTTCTAT TGTCAATTTC CTTTTGCCAA TTATACGTAG 
    ACTAGGCTCT AAATTGATAT CGATCCCAAC ACNGGACTTT CAATCTCCCG 
    GTTACAGGCT CCGCCTCTCC TCATGGCCAT TTCTTTTAAA TGATTGGACT 
    TATTTTTTGT GAAAAAATAT ATAGAAGTTA AAAATATTTG GACATATTTA 
    ACAAAAAAAA AAANAAAGTN NAAANGTTAA AANANCTTTT TTTTNNAATT 
    CCCTTTTNNA GGGNCCTTTN NNNANAANAN NATTTGGGGT NANAATGGNN 
    CNTTNTCNTT NGNNCCGNNC CNGNTNCNCC NTNCCNNTTN NTTTNNNNTT 
    TTNAAAAGTT TTTTNNCAAN NAAATTTTTN AANGGANTNG NTTTNTTNNA 
    AANNAAANGA AAAAAAANGG GGGNTTGGNC CNTTTTGGGN CNANGNAAAA 
    CCCNNAAAAA AAANTNTTCC CCNAAACCNA ATTNCCNNTT TTTTTTNACN 
    GGNAAAAANT NCNAANTTNN NNGGGGGGGA TTTNCCAANC CTNAACCTNN 
    AANCTTTNCC NNAAANTNNC NACCCGGGNC NGNAACNCGG NGNNNNNTTN 
    NNA

AT2G21130.1

Model type
Protein coding
Short Description
Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein
Computational Description
Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein; FUNCTIONS IN: peptidyl-prolyl cis-trans isomerase activity; INVOLVED IN: protein folding; LOCATED IN: plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Cyclophilin-like (InterPro:IPR015891), Peptidyl-prolyl cis-trans isomerase, cyclophilin-type (InterPro:IPR002130), Peptidyl-prolyl cis-trans isomerase, cyclophilin-type, conserved site (InterPro:IPR020892); BEST Arabidopsis thaliana protein match is: rotamase CYP 1 (TAIR:AT4G38740.1); Has 16606 Blast hits to 16571 proteins in 2692 species: Archae - 108; Bacteria - 6886; Metazoa - 2917; Fungi - 1384; Plants - 1286; Viruses - 4; Other Eukaryotes - 4021 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G21140.1

Model type
Protein coding
Short Description
proline-rich protein 2
Curator Summary
Proline-rich protein expressed in expanding leaves, stems, flowers, and siliques.
Computational Description
proline-rich protein 2 (PRP2); CONTAINS InterPro DOMAIN/s: Pollen Ole e 1 allergen/extensin (InterPro:IPR006041); BEST Arabidopsis thaliana protein match is: proline-rich protein 4 (TAIR:AT4G38770.1); Has 15440 Blast hits to 6990 proteins in 709 species: Archae - 42; Bacteria - 1645; Metazoa - 5634; Fungi - 879; Plants - 4869; Viruses - 674; Other Eukaryotes - 1697 (source: NCBI BLink).
Link
InterPro Scan - TAIR