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54-4658-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 1103258 [Map]; Strand: c
      • AT2G03620.1 - [+] show detail - magnesium transporter 3
        Distance: -490; Region: promoter
      • AT2G03620.2 - [+] show detail - magnesium transporter 3
        Distance: 0; Region: intron1 (5UTR)
      • AT2G03630.1 - [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein ...
        Distance: 0; Region: exon1 (CDS)
      • AT2G03630.2 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 54-4658-1 - 5-prime edge 
    GGGATAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATACTT GATCTTGATC ATGTTTTTGT TTGGATAACA 
    CATGTTCTTC ATGTTTAGAC TCCATAAACA CCTGGAGAAG CAATCATCAA 
    TGCATCATTT TAAGCAATTT CTCGGGCTAT TCGAACAAAT ATAACATCAA 
    AAAACATACC TTGAAATCGA TTTGACCAGA GCCTGATGAG TGAAGTTGTG 
    AAATTTCGTT TCTTTTTCTT GCTAGAGAGA ATGAAGGAAG AAAGAAAAAA 
    ATTAAGATGA GGAAAAGGGG ATCTAGGGTT TGGTTCGTTG TCTGGAGATA 
    AACAGAACGA AAGGTATCTC GTAAAGTTCG GAACTTTAAC TAACAAAACC 
    ATGGCTGCAT TTCGCGCCAT GTCTTCTTAT CTGTTCTGTT TTATAAATGA 
    TCCTCTGTGT TACGGTCTAT TTAAGAAACC GTGTTCTATC CAATAGATAA 
    ACGCCTTGAC TTTTAACACG TGGCTTCAGA TACTAGAACA AAAAAAAAAN 
    NCNNCNTGGN CNATNTTNTN CCTTTTNNGT TACCGGTNGG GGNAANGGAA 
    AANTTCCNAC CCGGGNCCNN NACCCCCT

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 1103303 [Map]; Strand: c
      • AT2G03620.1 - [+] show detail - magnesium transporter 3
        Distance: -535; Region: promoter
      • AT2G03620.2 - [+] show detail - magnesium transporter 3
        Distance: 0; Region: intron1 (5UTR)
      • AT2G03630.1 - [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein ...
        Distance: 0; Region: exon1 (CDS)
      • AT2G03630.2 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 54-4658-1 - 3-prime edge 
    ATCAAGATGT AAACAAAAAA GGTTCATTAG ACGACGAAAA TGGAGATGTT 
    GAGCATAAAA CGATACCTTT ACAAGAAACA GAAACTGTAA TTATTAACTC 
    AGAATCACAT TCAAGATTAT CATCGTCTTC GTCATCTTCG TCGTCTTCTT 
    CTTCTTCGTA TTTATCGCCA CCGAAAGATC TACCTGAAGA GGTACTAAAA 
    GAATCATTGA ATGATCCGGA GATTTCTTCA CCACCTGTTC AAGTAATGGA 
    TAGAGATAAC AACGGAAAAT ATGACCCGAA TAGGATTCCA TCTTCGGTTT 
    TCGAGAGAAG CAAATCGAAT GTGCCAGCTG AATGGAGCTG CACTTCGAAT 
    GAATCTCTCT TCAGTATTCA TTTAGGAAAC AATAGTTTCA CTGGTTATGG 
    TGGTGATTTG ATGAAATCAG GTGAACTTTA TAAATCCGGT GAGTTACTTG 
    CGTATAGTCC TGGACTTCCT ATGCCGCCTG TACCAGGATC GGAACCAAAA 
    CCCGTAGTCG AAGAACCGAA AGTTGTTGAA TCAGATAAGG AAGAGAAAGT 
    TGTACTAGTA GAAGAAACAC ATACATCATC ATCAGATGAA GAAGAAGGGA 
    AAAGAGAAAG CCATGAGAAA GAACAACATC CTGCTGTTTC TTGGAAAACT 
    CCTACAACTT CTTACCGTTC TAACCGAAGC TCAAACAGCG CGCACTCCTT 
    CTCTTTCCNA TGTAAAT

AT2G03620.1

Model type
Protein coding
Short Description
magnesium transporter 3
Curator Summary
Transmembrane magnesium transporter. One of nine family members.
Computational Description
magnesium transporter 3 (MGT3); BEST Arabidopsis thaliana protein match is: magnesium transporter 2 (TAIR:AT1G16010.3); Has 780 Blast hits to 741 proteins in 158 species: Archae - 0; Bacteria - 6; Metazoa - 65; Fungi - 215; Plants - 401; Viruses - 0; Other Eukaryotes - 93 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G03620.2

Model type
Protein coding
Short Description
magnesium transporter 3
Curator Summary
Transmembrane magnesium transporter. One of nine family members.
Computational Description
magnesium transporter 3 (MGT3); BEST Arabidopsis thaliana protein match is: magnesium transporter 2 (TAIR:AT1G16010.3); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G03630.1

Model type
Protein coding
Computational Description
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G74220.1); Has 126 Blast hits to 126 proteins in 28 species: Archae - 0; Bacteria - 6; Metazoa - 7; Fungi - 5; Plants - 87; Viruses - 0; Other Eukaryotes - 21 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G03630.2

Model type
Protein coding
Computational Description
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G74220.1); Has 87 Blast hits to 87 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 85; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).
Link
InterPro Scan - TAIR