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54-4750-2

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 17954249 [Map]; Strand: w
      • AT4G38340.1 - [+] show detail - Plant regulator RWP-RK family protein
        Distance: -461; Region: promoter
    Flanking Genome Sequence: 54-4750-2 - 5-prime edge 
    CTNGAAAAAC TAACAAAATC GGTTATACGA TAACGGTCGG TACGGGATTT 
    TCCCATCCTA CTTTCATTAC TTATTTTGAC TTTGATAACG CACACTAATA 
    AGTGACCTCT CTCTCTCTCT CTTCTTTTCT TATCTACAGT ACTTTTTTTT 
    GGTTTACCAT CTGCCTTTCT GTCATTGGCT TCTTCANAAA CAATTTCTAA 
    ATTTGCAATA AAGAGTGTTT GAAACTTGAG AAGTGAAGTA AAATAACGAC 
    TAAGGAGGGG ATGCATGCTT ATACCATTAT GACATGTTCC TTTNGGAATC 
    TTTCATGGAA TCACCCTTGA TTAGNGATTA TATATGTATT TTTTTTAAAG 
    TATTATCGNG AAGCCCTAGC TTTCGTTGCC TTTATAACCT ATAGTAGGAA 
    ATAAAAAATG AATATATAGT AAGTACATCG ACTCGAGTGC TTCTGATACA 
    ATCAATATAA ACCACCCAAC CCTCGGAGAT TCANAACTTT GGATTTTTGA 
    TTATATAAAA TTTGAATAGT TAATTAGTAT TTATGGGGGG ACCTTTTAAA 
    AAGATTCTGC ACGCTCACAA CCAAAGATTC CCTCCATCTT CTTCTTCTTC 
    TNTGGATC

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 17954250 [Map]; Strand: w
      • AT4G38340.1 - [+] show detail - Plant regulator RWP-RK family protein
        Distance: -460; Region: promoter
    Flanking Genome Sequence: 54-4750-2 - 3-prime edge 
    ATTTGAAAAC GGTAGAGGTA TTTTACCGAC CGTTACCGAC CGTTTTCATA 
    AATAACTAGT GTGATGACTC TTGAGAGTTA CTGGAAGCCA AAGCCCCTCA 
    AATGCCAAGC T

AT4G38340.1

Model type
Protein coding
Short Description
Plant regulator RWP-RK family protein
Computational Description
Plant regulator RWP-RK family protein; CONTAINS InterPro DOMAIN/s: Octicosapeptide/Phox/Bem1p (InterPro:IPR000270), Plant regulator RWP-RK (InterPro:IPR003035), GAF (InterPro:IPR003018); BEST Arabidopsis thaliana protein match is: Plant regulator RWP-RK family protein (TAIR:AT1G76350.1); Has 720 Blast hits to 573 proteins in 47 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 7; Plants - 646; Viruses - 0; Other Eukaryotes - 63 (source: NCBI BLink).
Link
InterPro Scan - TAIR