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Mutant Lines
54-4953-1

54-4953-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 5; Position: 24753782 [Map]; Strand: w
- AT5G61560.2 - [+] show detail - U-box domain-containing protein kinase family protein
  Distance: 0; Region: exon4 (CDS)
- AT5G61560.1 - [+] show detail - U-box domain-containing protein kinase family protein
  Distance: 0; Region: exon4 (CDS)

GTTTCAACTA CAAGAAAAGA TTTGACCACA AGTGTTTACA AAAAAGATGT 
TGATAGAAAA ACCAGAGAGA TGCTTCTTCC AAGCAGAGAC ATGTTTGTTC 
ATAGAGAGGT ATATTCGTAA CNTTCTCTCA CAGATTTGAT CTGTTATTTT 
AGTATGAATC TAAAATCTTG TGAAATGTGA ATAGGTTCAA TTGGATATAA 
TGGTGCTTGA ATCAGACGAT ATAGCTGATG CAATCTCTAA AGCAGTTCAA 
GATCATGGAA TTAGTGAGCT AGTCATTGGA GCTTCCTCTT CAATCATCTT 
CTCATGGTAA CATTTAAAAC ACAATCTCTT AGCTTTAGAT TTCCATCAGA 
TTGTTTAATC TTTTTCCTTT TGTAGGAAGT TGAAGAGAAG CAACTTGTCT 
TCAAGAATTG CAGATGCTAC ACCAAGATTT TGCTCAGTTC ATGTTATCTC 
TAAAGGAAAG CT

3 prime edge [+] show sequence
1. Chromosome: 5; Position: 24753659 [Map]; Strand: w
  - AT5G61560.2 - [+] show detail - U-box domain-containing protein kinase family protein
    Distance: 0; Region: intron3 (CDS)
  - AT5G61560.1 - [+] show detail - U-box domain-containing protein kinase family protein
    Distance: 0; Region: intron3 (CDS)
Flanking Genome Sequence: 54-4953-1 - 3-prime edge
```
CCGAATTCGA ATCTCCTGTT TTTAACTCAA CAATATCAGA TC
```

AT5G61560.1

Model type: Protein coding
Short Description: U-box domain-containing protein kinase family protein
Computational Description: U-box domain-containing protein kinase family protein; FUNCTIONS IN: ubiquitin-protein ligase activity, protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, protein ubiquitination, response to stress; LOCATED IN: chloroplast, plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: UspA (InterPro:IPR006016), Protein kinase, ATP binding site (InterPro:IPR017441), U box domain (InterPro:IPR003613), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: U-box domain-containing protein kinase family protein (TAIR:AT4G25160.1); Has 112471 Blast hits to 110615 proteins in 4538 species: Archae - 130; Bacteria - 13122; Metazoa - 41054; Fungi - 8748; Plants - 32669; Viruses - 288; Other Eukaryotes - 16460 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT5G61560.2

Model type: Protein coding
Short Description: U-box domain-containing protein kinase family protein
Computational Description: U-box domain-containing protein kinase family protein; FUNCTIONS IN: ubiquitin-protein ligase activity, protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, protein ubiquitination, response to stress; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: UspA (InterPro:IPR006016), Protein kinase, ATP binding site (InterPro:IPR017441), U box domain (InterPro:IPR003613), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: U-box domain-containing protein kinase family protein (TAIR:AT4G25160.1).
Link: InterPro Scan - TAIR