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Mutant Lines
54-4960-1

54-4960-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 2; Position: 19607888 [Map]; Strand: w
- AT2G47890.1 - [+] show detail - B-box type zinc finger protein with CCT domain
  Distance: -108; Region: promoter
- AT2G47890.2 - [+] show detail - B-box type zinc finger protein with CCT domain
  Distance: -108; Region: promoter

CTCTTGAGCC CTTCATTAGT TATGATCTTA TTTACTTTTT AAAAATCTAA 
CCAAGTACTG TATATTATAT ATGTGGTAGC CAAAATATTA TGTTAAATTC 
TAGGCTAATC CGATATATAT CATGTCAAGA AAAATCAATA TATAAAAATG 
GAGAGCTATT TTTCACGAGT TAAGTGAGAG AGATGAGTAA AGAAAGGCAC 
GGGAAGGTGA AGAGAGTGTA GGTTTCCAGC TTCTTCCCCA AGAAATAAAA 
TGTATTTGAC TTTGTCTAAG CAAATATGTC GTCACTTTAA CGTCATTCAT 
TACCTAGAAT GCAATTAAGA TATGGCTTTT ACATAAGCCA CCAAATTTGG 
TTTTGTTGCC CCAAAATATC CCAAGAAAAG ATCAACTTCT TCTTCTTACC 
AAAACTGTCG GCGTCGTCTC CTCTAAGCTC CTCCCATGGA AGCAGAAGAA 
GGTCATCAGC GTGACCGCCT CTGCGACTAT TGCGACTCCT CCGTGGCTCT 
TGTCTACTGC AAAGCTGACT CCGNCAAGCT CTGCCTCGCC TGCGACAAGC 
AAGTCCACGT CGNCNACCAA CTCTTCGCCA AACACTTCAN GTCACTTCTC 
TGCNACTCCT GCAACGAATC TNCCTNTTTC CCTTTNCTGC GAAACTGAAA 
GGNCTGTTCT TTTGCCANAA CTGCNACTGG CACCNCCNCA CTGNCTNTTN 
CCTCCCTTNA

AT2G47890.1

Model type: Protein coding
Short Description: B-box type zinc finger protein with CCT domain
Computational Description: B-box type zinc finger protein with CCT domain; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: stem, inflorescence meristem, root, flower, stamen; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: CCT domain (InterPro:IPR010402), Zinc finger, B-box (InterPro:IPR000315); BEST Arabidopsis thaliana protein match is: B-box type zinc finger protein with CCT domain (TAIR:AT1G28050.1); Has 3246 Blast hits to 2264 proteins in 130 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3153; Viruses - 0; Other Eukaryotes - 93 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT2G47890.2

Model type: Protein coding
Short Description: B-box type zinc finger protein with CCT domain
Computational Description: B-box type zinc finger protein with CCT domain; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: stem, inflorescence meristem, root, flower, stamen; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Zinc finger, B-box (InterPro:IPR000315); BEST Arabidopsis thaliana protein match is: B-box type zinc finger protein with CCT domain (TAIR:AT1G28050.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR