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54-5034-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 26455222 [Map]; Strand: w
      • AT5G66200.1 - [+] show detail - armadillo repeat only 2
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 54-5034-1 - 5-prime edge
    CTCCCAGATC AGGCAAAGGA TGGGTTCGTT GGCGGCGATT GGTGGAAGAC 
    CAAGGTAGCC AGCGTCACCA CGGTCTTCCG CCGGAGCGGA GACACGGAGG
    AGCCAGGAAA CGTCTCCGAT AGAGTTCTCC AACTGACCAG ACATCTTCCG
    GAACGCGGCG GCGGGGATGA TGGTGAAAAC TCGCTTCATG AGGCCATTGG
    CTCGGCACTT TAAGACAAGG GAGAGAGCCT TCTCAAGCAT CTGCTCCGTG
    TCGTCGATGA TACNGGCGAG TGGGTCGCTC GTAAAGGTCG TTGCTGGCGC
    GGGCAGCCTG ACGGAGAAGA CCGGCGAGCT TTCTCGGTCT TAGCCTTGAG
    TTCGCCGCAC TCTTGCTTGA AGGAACTAGC CTCATCGGCG GCTTTGACCA
    CCTGGTCAGA CAGTTGAATC GGCTTCGCTA GGATTTGCTT GACGATGTCT
    GCCATCGTCG ATATCAGATC AAATGGCGAA TCGAGATTCA GAAACCCGAA
    AGAGAAAGGA CTAAACTTTG AGGAATTAGG GTAAAAAGGA TAAAGCT
  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 26455106 [Map]; Strand: w
      • AT5G66200.1 - [+] show detail - armadillo repeat only 2
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 54-5034-1 - 3-prime edge
    TCTGGGAGCA GATTGCCATT CTCTACACCG GATCGCTTGA AGACCGCTCC 
    GATGCCGCCG CCTCGCTGGT ATCTCTGGCC CGTGACAACG ATCGCTACAC
    GAAGCT

AT5G66200.1

Model type
Protein coding
Short Description
armadillo repeat only 2
Curator Summary
Armadillo repeat protein. One of a family of four in Arabidopsis. Expressed in vegetative tissues, anthers and ovules.
Computational Description
armadillo repeat only 2 (ARO2); FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: armadillo repeat only 1 (TAIR:AT4G34940.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR