1. Home
  2. Mutant Lines
  3. 54-5161-1

54-5161-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 19683297 [Map]; Strand: c
      • AT2G48121.2 - [+] show detail - LOCATED IN: mitochondrion; BEST Arabidopsis thaliana protein match is: Ribonu...
        Distance: 906; Region: intergenic
      • AT2G48130.1 - [+] show detail - Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfa...
        Distance: 1769; Region: intergenic
    Flanking Genome Sequence: 54-5161-1 - 5-prime edge 
    ATTCACACAT TAATCTCACT CTCTTCTGCA CATTGCATGG TGTGGTGTAG 
    CTATGGTTCC CACACAATTT GTCATATTCA TTTACAACAA AGTTCATGAA 
    TCATGTTTGA AGTGAATCCT TTTTTTTCAA ATTTAGTCAT CTCTCGAGGA 
    ACTTTAAAGT TAAAAGAATA AGATAAAGCT

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 19683360 [Map]; Strand: c
      • AT2G48121.2 - [+] show detail - LOCATED IN: mitochondrion; BEST Arabidopsis thaliana protein match is: Ribonu...
        Distance: 969; Region: intergenic
      • AT2G48130.1 - [+] show detail - Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfa...
        Distance: 1706; Region: intergenic
    Flanking Genome Sequence: 54-5161-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCGT 
    GATGTGTGAT GGGATCTTTG CAGTTGAAAG TTCATCTCCT AAAGTCAAGA 
    AAACATTAAC TAACAAAATG AGGACAAACT TTTACCAATT TTCACATTTT 
    TAGAAATATA TTCAACTCAC TTTGATTTCT TCAGGGGCTC AGCTGAATCT 
    AGTTTTCAAT GGTTGCAGAA CAAAATGAAA ATGAAAATTT TAGTATCTCA 
    AAATCTAGTT TCTATTTTTT TTTGGNGACA TTAATCAATG ATTTCAAAAT 
    ANCCAAAANC CTCAAAATAA NCTCAATTGC NTCTTAAAAC CNCNCANCTT 
    TCATAACTGA ANAATGACGA AAAACAAAAT ANTAGAGGAG GANCATCACT 
    ACTATTTTCA TTTTTTTANC CAATCANAGN GCACTAAACA ACGCCCACTC 
    NCACCAATNT CGCGTCACNC CCTCCAAACC ACGCCCACTC GCACGAACCT 
    NNCGTTAANC NCGTGTGGNC GATTTNTGTA GGGGTAAACC CCCNAAATCA 
    TGCCCTATTT TACATTTACT CNCTTTGTTT NTAAAANAGC CCTNNAACNA 
    NCCNGGGGCC GGNNNNCNNC CCNGCNCC

AT2G48121.2

Model type
Protein coding
Computational Description
LOCATED IN: mitochondrion; BEST Arabidopsis thaliana protein match is: Ribonuclease III family protein (TAIR:AT4G37510.1).
Link
InterPro Scan - TAIR

AT2G48130.1

Model type
Protein coding
Short Description
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Computational Description
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein; FUNCTIONS IN: lipid binding; INVOLVED IN: lipid transport; LOCATED IN: anchored to membrane; EXPRESSED IN: hypocotyl, root, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612), Plant lipid transfer protein/Par allergen (InterPro:IPR000528), Plant lipid transfer protein/hydrophobic protein, helical domain (InterPro:IPR013770); BEST Arabidopsis thaliana protein match is: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (TAIR:AT3G22600.1); Has 1201 Blast hits to 1197 proteins in 63 species: Archae - 0; Bacteria - 8; Metazoa - 1; Fungi - 0; Plants - 1190; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).
Link
InterPro Scan - TAIR