1. Home
  2. Mutant Lines
  3. 54-5186-1

54-5186-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 301040 [Map]; Strand: w
      • AT4G00730.1 - [+] show detail - Homeobox-leucine zipper family protein / lipid-binding START domain-containin...
        Distance: 0; Region: intron7 (CDS)
      • AT4G00730.2 - [+] show detail - Homeobox-leucine zipper family protein / lipid-binding START domain-containin...
        Distance: 0; Region: exon7 (3UTR)
    Flanking Genome Sequence: 54-5186-1 - 3-prime edge 
    CTTGTCATTA TGCTTAACAT AATTAATCTT GTCATTATGT TACAAAACTT 
    TTGACCATTT TACATGCAAA AGCAGCAATA ACGCCTGGTG GTCGAAAAAG 
    CATGCTGAAG TTAGCTCAAC GCATGACGTT CAACTTCTGT TCGGGAATCT 
    CGGCGCCGTC GGTCCACAAT TGGAGCAAGC TCACTGTTGG AAATGTTGAC 
    CCGGACGTTC GAGTTATGAC CCGTAAGAGT GTGGACGATC CAAGAGAGCC 
    TCCGGGGATT GNTTTGAGTG CTGCCACTTC TGTTTGGGTA CCTGGNGGGN 
    CCACAAGGGG CTGGATTATT TCTTGCNGAA NNAANNGATN NAGANGCNAA 
    TGGGNTTTTT NTATTNCACN GGGGGGCCCC NNCNCGNGAN NGGGGCCTTT 
    TNCCNNNNGN GNGGGANNNA NGGGGGGNGN TNTTNNTNNN CNGGAGATGT 
    NNNNTTTTCC NNNANANNNN NNCNCNNNNG GGAANGNGGG GGNNNGNGNN 
    GGGGGGAAAA ANNNCCNNCA CG

AT4G00730.1

Model type
Protein coding
Short Description
Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein
Curator Summary
Encodes a homeodomain protein of the HD-GLABRA2 group. Involved in the accumulation of anthocyanin and in root development
Computational Description
ANTHOCYANINLESS 2 (ANL2); FUNCTIONS IN: transcription regulator activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: root development, anthocyanin accumulation in tissues in response to UV light; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Homeobox (InterPro:IPR001356), Homeobox, conserved site (InterPro:IPR017970), Homeodomain-like (InterPro:IPR009057), Lipid-binding START (InterPro:IPR002913), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeodomain GLABROUS 1 (TAIR:AT3G61150.1); Has 12660 Blast hits to 12608 proteins in 595 species: Archae - 0; Bacteria - 0; Metazoa - 9962; Fungi - 223; Plants - 2228; Viruses - 1; Other Eukaryotes - 246 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G00730.2

Model type
Protein coding
Short Description
Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein
Curator Summary
Encodes a homeodomain protein of the HD-GLABRA2 group. Involved in the accumulation of anthocyanin and in root development
Computational Description
ANTHOCYANINLESS 2 (ANL2); FUNCTIONS IN: transcription regulator activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: root development, anthocyanin accumulation in tissues in response to UV light; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Homeobox, conserved site (InterPro:IPR017970), Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), Lipid-binding START (InterPro:IPR002913), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeodomain GLABROUS 1 (TAIR:AT3G61150.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR