1. Home
  2. Mutant Lines
  3. 54-5225-1

54-5225-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 25947888 [Map]; Strand: w
      • AT5G64930.1 - [+] show detail - CPR5 protein, putative
        Distance: 0; Region: intron1 (CDS)
    Flanking Genome Sequence: 54-5225-1 - 5-prime edge 
    CCAAAACCTA GTATTCACGC AAGGTCAACT ATAGGAACAA CCCGTACCAG 
    CAAAGCCAAT TTCGTATCAA AACAGTTATG TGATGCAATA AAGATCAAAG 
    TTTGGAAATT GATCGAACCA TATTAGCAAA AGCGGCAAGT GAAAAGCCCA 
    GAGGCTTCGC CAATTTTTCA GCTTGTCGTT CACCAACGCT TCGTCGAGCC 
    ATACCTAACC GCATAGGGTT TCGTAATCTA TGAACCACTC TCGTAACCCT 
    TTTAGTAGAA TTTGAATTAG AGGTAGAAGA TGTAGAACAA TAGGACGAAG 
    AAGCT

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 25942889 [Map]; Strand: w
      • AT5G64910.1 - [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein ...
        Distance: 0; Region: intron8 (CDS)
      • AT5G64910.2 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
        Distance: 0; Region: intron8 (CDS)
    Flanking Genome Sequence: 54-5225-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATACA 
    AATCACGTCT TCTATAACTT CCTAACTTGC ATGGTAACAA GACATTGGGA 
    GGAAAAGATA CCACAGAGTA TTTACCTTCT CTGAGTACAG CCCAAGATGA 
    AAATTGGAAA GTTCTTTTTA TCAACTTGTC TATCCCTGCA GAAGAACAAA 
    AGCAGATGAA ATTAGCAACA ACTCCCATAA ACATCAAAAG TAAGAAGAGT 
    AATACACAAA TATACTATCT GTTTCATTGC TTAAGACCCT CTCACGAAAA 
    TATGTGTACA ACTCAGGGAT GTCTATATAC CTTTGTTCAA GTGGGATGTA 
    AGGAACCCAA GCCATTTTCA TAGTTTTCAT TGCAATAATT TCCCCAACCT 
    CTCCTTGAAC CGATGCAACT CCTATCTCAT CAGAAGGGGG AATAGGNGAA 
    TCAATCTGTN AATAGATAAG AACCANAATT AACCGGCAGT TATAGATAAA 
    CAATATGATC TTGNNTTCCN ATCACAATGC CNAGCTTATT TTTNAAACAC 
    CCNGGACATG AGGTNAAAAA CGAAACCNAA NCNTTCNCNN NCNAACNNCC 
    GGAGCNNNGG GNNTNCNNNG NNNNNTCTNG NGNGGNGAAN NGAATGAGCN 
    NANTNNNNNA NNNANNANNN NNNAAGGGGG GGNGANNGNN NTTNNNTTGG 
    NNNGNNNGNG GGNNCNNGNN NGANNNNNNN NCCNCNGGGG GNGGGGANNA 
    AANNTNNT

AT5G64910.1

Model type
Protein coding
Computational Description
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G10010.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G64910.2

Model type
Protein coding
Computational Description
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G10010.1).
Link
InterPro Scan - TAIR

AT5G64930.1

Model type
Protein coding
Short Description
CPR5 protein, putative
Curator Summary
Regulator of expression of pathogenesis-related (PR) genes. Participates in signal transduction pathways involved in plant defense (systemic acquired resistance -SAR).
Computational Description
CONSTITUTIVE EXPRESSION OF PR GENES 5 (CPR5); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR