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54-5229-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 343793 [Map]; Strand: c
      • AT5G01890.1 - [+] show detail - Leucine-rich receptor-like protein kinase family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 54-5229-1 - 5-prime edge 
    TGCAGCTCCA TCCGTCTGCG AGGAAACTCT CTGATCAGAG AAATCCCTGA 
    TTGGATCGGC GACATTGCCA CTCTCGAGAT TCTTGATCTC TCCGCCAACA 
    ACTTCACCGG CACTGTCCCA TTCTCCCTCG GAAATCTCGA GTTTTTGAAG 
    GATCTCAATC TATCCGCAAA CATGCTCGCT GGAGAGCTCC CACAGACTCT 
    CTCCAACTGC TCCAACCTAA TCTCCATTGA TGTCAGCAAG AATT

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 343886 [Map]; Strand: c
      • AT5G01890.1 - [+] show detail - Leucine-rich receptor-like protein kinase family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 54-5229-1 - 3-prime edge 
    TTTTAAANNG GACTGAGGTA TTTTNTNGAC CGTTACCGAC CGTTTTCATC 
    GAATCCGGAA GATTCCTGGA GAAGTAGTTC TCACTCAAGT CAAGCGATTT 
    AAGGGAAGAG CATAGTCCGA TGTCGGAAGG AACGTCACCG GAAAACCAGT 
    TCCTGGATAA GTTGATATGA CGGAGATCGT AGAGACCGCC GAGGCCATCG 
    GGGATATCTC CTTGGAGGAA ATTGTGAGAG AAATCAAGGG ACTTTAAGCT 
    CTTGAGGAAC CAGATATCTC GGGGCAACCT CCCAGAGAGT TGATTGCTTG 
    AGAGGTTAAG ATGGGTGAGA GTAGAACAGT AGCTGAGGGA GACAGGAATA 
    GAACCTGTGA GTTTGTTGTT AGCCAAGGAA ACGGACCTCA AGGACCCGCA 
    TTGCTCGAAG AACCCGTCTG GGATC

AT5G01890.1

Model type
Protein coding
Short Description
Leucine-rich receptor-like protein kinase family protein
Computational Description
Leucine-rich receptor-like protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT3G56370.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR