ET1101

CSHL Arabidopsis genetrap mutant lines

Original: ET1101

Phenotypes

Morphological phenotypes

Original description

  • segregates dark misshapen leaves
Anatomical entity
/structure development stage		 Phenotypes
vascular leaf (PO:0009025)
  • abnormal (PATO:0000460)

Original: ET1101

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 18250895 [Map]; Strand: c
      • AT2G44120.1 - [+] show detail - Ribosomal protein L30/L7 family protein
        Distance: 0; Region: exon1 (5UTR)
      • AT2G44120.2 - [+] show detail - Ribosomal protein L30/L7 family protein
        Distance: -187; Region: promoter
    Flanking Genome Sequence: ET1101 - 5-prime edge 
    GGACAAGGCC TGAGTATGTA TATGTCATTT AAAACCAAGC CCAATTTAAG 
    TTAAATAAAT AGGCCCACTT TGGAAAAATG ACTGCTGACT AAAAAATTAG 
    GGTTACGAAA TAAACCCTAA ACCCAGTTTC GACTTTGTTT GTTTTGTCCT 
    CCTTCTACGC CGCACACTAT CTCTTCATCT CTCTCG

AT2G44120.1

Model type
Protein coding
Short Description
Ribosomal protein L30/L7 family protein
Computational Description
Ribosomal protein L30/L7 family protein; FUNCTIONS IN: structural constituent of ribosome, transcription regulator activity; INVOLVED IN: translation; LOCATED IN: in 7 components; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L30, N-terminal (InterPro:IPR012988), Ribosomal protein L30p/L7e, conserved region (InterPro:IPR000517), Ribosomal protein L7, eukaryotic (InterPro:IPR005998), Ribosomal protein L30, conserved site (InterPro:IPR018038), Ribosomal protein L30, ferredoxin-like fold domain (InterPro:IPR016082); BEST Arabidopsis thaliana protein match is: Ribosomal protein L30/L7 family protein (TAIR:AT2G01250.1); Has 1303 Blast hits to 1301 proteins in 392 species: Archae - 217; Bacteria - 1; Metazoa - 455; Fungi - 213; Plants - 195; Viruses - 0; Other Eukaryotes - 222 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G44120.2

Model type
Protein coding
Short Description
Ribosomal protein L30/L7 family protein
Computational Description
Ribosomal protein L30/L7 family protein; FUNCTIONS IN: structural constituent of ribosome, transcription regulator activity; INVOLVED IN: translation; LOCATED IN: in 7 components; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L30, N-terminal (InterPro:IPR012988), Ribosomal protein L30p/L7e, conserved region (InterPro:IPR000517), Ribosomal protein L7, eukaryotic (InterPro:IPR005998), Ribosomal protein L30, conserved site (InterPro:IPR018038), Ribosomal protein L30, ferredoxin-like fold domain (InterPro:IPR016082); BEST Arabidopsis thaliana protein match is: Ribosomal protein L30/L7 family protein (TAIR:AT2G01250.1); Has 1301 Blast hits to 1299 proteins in 392 species: Archae - 217; Bacteria - 1; Metazoa - 453; Fungi - 213; Plants - 195; Viruses - 0; Other Eukaryotes - 222 (source: NCBI BLink).
Link
InterPro Scan - TAIR