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ET12281

CSHL Arabidopsis genetrap mutant lines

Original: ET12281

Phenotypes

Morphological phenotypes

Original description

  • semi-sterile
Anatomical entity
/structure development stage		 Phenotypes
seed (PO:0009010)
  • present in fewer numbers in organism (PATO:0001997)

Original: ET12281

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 26734261 [Map]; Strand: c
      • AT1G70910.1 - [+] show detail - RING/U-box superfamily protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: ET12281 - 3-prime edge 
    TTTTACCGAC CGTTACCGAC CGTTTTCATC CCGTCGAACA AGGTTACTTT 
    AGGATCAAGC GATTCTCCTC CGTTCCCTAC CCCTCACCTC TTTTTGAAAA 
    ACATCGTGAG CTTTGATGAA CAAAGCATGT ATAATCTTCT CTATCCAAGG 
    CTCCAAGATC CCAACTTATG CAGTATTCTC TCCTTCAAGA TCGCTTTCGA 
    AGCCAAGCGA GTTCCAGGGC CGTTGTACAT CTCCTATGAC GTCACATTAA 
    CCCCACAAAT ATTCGAGGAA CCAGACATGG AAACATGCGG TCTTTGCTTG 
    TTGGAGGAAC AGCACTTATT CGACATGCCA AATTGTGCGC ATGTGTTTCA 
    TGGTGATTGT ATCGATAAGT GGTTAAGTAC AAGTAATAAT TGCCCTCTCT 
    GTGGTGTTGA AATTATGGAT GACGACGAGT GACGAGCATC GTCATGAAGA 
    AACGATTACG CATTATGATA TTCTGTATTG AAACCTATCA CTTGATTTTT 
    TAATATGTTA ATGGGAGAAT GTTCCTAAAC GAGATGTACT CTCCGGTTTG 
    GAAAGGAACT CATGAAATTG TTTGTGTTAA TCTGCATACT AACCTAAATA 
    TCTAAGCATA ATCGGATAAT AACCT

AT1G70910.1

Model type
Protein coding
Short Description
RING/U-box superfamily protein
Curator Summary
Encodes DESPIERTO (DEP), a RING finger protein involved in ABA sensitivity during seed development. Regulates the expression of ABI3, and produces a complete loss of dormancy when mutated.
Computational Description
RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT1G57730.1); Has 4098 Blast hits to 4089 proteins in 211 species: Archae - 0; Bacteria - 0; Metazoa - 942; Fungi - 90; Plants - 2574; Viruses - 12; Other Eukaryotes - 480 (source: NCBI BLink).
Link
InterPro Scan - TAIR