Home
Mutant Lines
ET12620

ET12620

CSHL Arabidopsis genetrap mutant lines

Original: ET12620

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET12620

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 1; Position: 8862554 [Map]; Strand: c
- AT1G25275.2 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: respo...
  Distance: 1211; Region: intergenic
- AT1G25280.1 - [+] show detail - tubby like protein 10
  Distance: -1223; Region: intergenic

ACTTTCTCCC GCAGTAGTTG CATTATTGGT TATTACAACA TAATTATATC 
TATGGATCTT GGTGACTTTT AAAGTTTAGG CACGAGTCTC TTTGGCCCTT 
CGGCTCCTGC AAATTACAAA GTACATGCAT CAACATCACT TCCAAGTCCG 
CTTTTGATTC CATTCATCAG TTACAAAACC AACTCATTTC GCAACTTTTT 
TTACAAAACC AACTCATTTC GCAACTTATG ATCTGATTCG AGTAGACAAA 
CACTTATTAA GTTTCATGTC CATACAAAAT CTGAATTTGT TACCAATCAA 
ACAAATATAA TATCATGGAT CGGTCCGGTT TCATTATACT GTTAGAGGAT 
TAATTATTTA TACATATACC TCCACATCGA ACGTAGCATT TGTGTTGGCG 
TCGGATCAGC TTTTATTCTG AAAAAGAGAT AATATTTAAG CGGATATATA 
AATCGAAACT TTAGGATCGG ATAAAAAAGA TAAGAAGAGA GTACTCACTG 
TCGGAATTAA CACAGCCGGT GGAGCAAGCG TCGTAGCATG TTTCTGCGCC 
TAACTTTCTA TATGGTCCGG GTCCTTATTT AGCCTCCGCC ACCATATCAA 
GGTTGGAAAA AAACATAAAG CCACCACAAT CAGAAGAGTA GCCAATATCG 
TCACTTGCTC CTTCATTGTT CTCCCTCGCT ACGATTTTCT TTCCTTTTTC 
ATAGTTAGGT CTTCTTTGTT TTTGTTTTTT CCTTCTCCCT CTCTTAAAAG 
AAGATCTATA GTTGTGGGTT AACATTTACT AAAAGACCTA AGGAAAATTT 
TTGGGGAATG TTGCCATGTT TGACCGTTTG

AT1G25275.2

Model type: Protein coding
Computational Description: unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to karrikin; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G25280.1

Model type: Protein coding
Short Description: tubby like protein 10
Curator Summary: Member of TLP family
Computational Description: tubby like protein 10 (TLP10); FUNCTIONS IN: phosphoric diester hydrolase activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), Tubby, C-terminal, conserved site (InterPro:IPR018066), Tubby, C-terminal (InterPro:IPR000007); BEST Arabidopsis thaliana protein match is: tubby like protein 1 (TAIR:AT1G76900.2); Has 961 Blast hits to 946 proteins in 118 species: Archae - 0; Bacteria - 0; Metazoa - 353; Fungi - 21; Plants - 475; Viruses - 0; Other Eukaryotes - 112 (source: NCBI BLink).
Link: InterPro Scan - TAIR