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Mutant Lines
ET12707

ET12707

CSHL Arabidopsis genetrap mutant lines

Original: ET12707

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET12707

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

3 prime edge [+] show sequence

Chromosome: 1; Position: 22600364 [Map]; Strand: w
- AT1G61270.1 - [+] show detail - Transmembrane amino acid transporter family protein
  Distance: 0; Region: exon5 (CDS)

TGAAACGGTA GAGGTATTTT ACCGACCGTT ACCGACCGTT TTCATCCCTA 
CTTTTGTGGG TATGTCTCTG TGATTTTCAT ACCAAGATTA CATATTTTGT 
AAAGAAAGAC TATCTAACTT GTATATATAT ATATATCACA GCCGCCACGA 
TGGGGATAGC AGTCGCTCTA CCGCATTTCA GTGCTTTGCT GTCATTTTTT 
GGAGGATTCA TATTTGCCCC GACCACATAC TTTGTAAGCT CTTAAACTCT 
ATCAACATAT CTTTCTTTCT TTTTTTGAAT AAAATGTAAA ATTTATTTCT 
AAAAAAAATT TGTTACAACA AGTGCATCGT CCAATTAAAA GATTTTAAAC 
AAATTTTCTA GGCAAAGCTA GTCTTCTTGG TGACTATCTT GAAGCAAACC 
ACATTCTCCT ACAATCTTCA T

5 prime edge [+] show sequence
1. Chromosome: 4; Position: 15810231 [Map]; Strand: c
  - AT4G32780.1 - [+] show detail - phosphoinositide binding
    Distance: 0; Region: intron3 (CDS)
  - AT4G32785.1 - [+] show detail - CONTAINS InterPro DOMAIN/s: Pleckstrin-like, plant (InterPro:IPR013666), Plec...
    Distance: -835; Region: promoter
Flanking Genome Sequence: ET12707 - 5-prime edge
```
GACATTATAT TTGAGGTTTC TCAAATGAAG TCCTTCTTTT TGTCAGCAAT 
TATTT
```

5 prime edge [+] show sequence

Chromosome: 1; Position: 22600435 [Map]; Strand: w
- AT1G61270.1 - [+] show detail - Transmembrane amino acid transporter family protein
  Distance: 0; Region: exon5 (CDS)

AAGTCCAGCG GATGGTAAAC CGTAGAACTC TTGTTGGACT GAAGTGCCAT 
TTCTTTATCA TTACAGATTC GATCATGTCA AATACGGGCA TTGCGTACAC 
CTAGGAAAAG AAATATGAAG GCGTTTTTTT AGTAGTTAGA AGTTTTCTAA 
TAGATAAGGT GTTTCTTGGT ATATATACCT GGTAGCTTCC CATGAGATGT 
ATAACCACAA ACATGTTGGC CACAATTATA AGTCCCTTCG GGCCCCGGAG 
TGTTTTGAGA ATGTTTTCTT CAACGTTGTT TCCGAATGTC CAAAACCCTA 
CAAGAGCCAC AGGGAAGTAA CAGAAAGCTA CAATAATATA GGCTACAATG 
GCTCCCTTCC ACATGGGTCG TTTTGATGGA TTTTCTGGTG TTGATGGAAT 
CGTTGCTTGA ATTTCTAAAA CAACATTGTG ACCTGCATAC GCAAAAGCCA 
TCTCCCCCAA TGCGCCTAAG AAGGCTAATG GCACTGAGGT GTTGTTTCTT 
CTTTTATAGC CGTATTCAAC ATTGTCCGCG ACACCCTTTG TCAGGGAAGC 
TACCCAAGCA ATTGTGGAAT AGCTATGGGA AAGTAATAAA ACATTGGTC

AT1G61270.1

Model type: Protein coding
Short Description: Transmembrane amino acid transporter family protein
Computational Description: Transmembrane amino acid transporter family protein; CONTAINS InterPro DOMAIN/s: Amino acid transporter, transmembrane (InterPro:IPR013057); BEST Arabidopsis thaliana protein match is: Transmembrane amino acid transporter family protein (TAIR:AT3G01760.1); Has 4440 Blast hits to 4407 proteins in 395 species: Archae - 7; Bacteria - 281; Metazoa - 1351; Fungi - 614; Plants - 1606; Viruses - 3; Other Eukaryotes - 578 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G32780.1

Model type: Protein coding
Short Description: phosphoinositide binding
Computational Description: phosphoinositide binding; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF828 (InterPro:IPR008546); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF828) with plant pleckstrin homology-like region (TAIR:AT5G43870.1); Has 405 Blast hits to 233 proteins in 34 species: Archae - 2; Bacteria - 17; Metazoa - 10; Fungi - 2; Plants - 172; Viruses - 6; Other Eukaryotes - 196 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G32785.1

Model type: Protein coding
Computational Description: CONTAINS InterPro DOMAIN/s: Pleckstrin-like, plant (InterPro:IPR013666), Pleckstrin homology (InterPro:IPR001849); BEST Arabidopsis thaliana protein match is: FORKED 1 (TAIR:AT3G63300.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR