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ET12717

CSHL Arabidopsis genetrap mutant lines

Original: ET12717

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET12717

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 3859071 [Map]; Strand: c
      • AT3G12110.1 - [+] show detail - actin-11
        Distance: 0; Region: exon4 (CDS)
    Flanking Genome Sequence: ET12717 - 3-prime edge 
    AACGGTAGAG GTATTTTACC GACCGTTACC GACCGTTTTC ATCCCTAGAT 
    GGAAACAGCA AACACAAGCT CATCCGTTGA GAAGAGCTAT GAGTTGCCTG 
    ATGGACAGGT GATCACCATT GGAGGAGAGA GATTCCGCTG CCCGGAGGTT 
    CTGTTCCAAC CGTCTTTGGT GGGAATGGAA GCTGCTGGTA TTCACGAGAC 
    CACTTACAAT TCCATCATGA AGTGTGATGT GGATATCAGG AAGGATCTGT 
    ATGGAAACAT TGTGCTCAGT GGTGGAACCA CCATGTTCCC TGGAATTGCT 
    GATAGGATGA GCAAAGAGAT CACTGCTTTG GCTCCAAGCA GCATGAAGAT 
    TAAGGTGGTT GCTCCACCAG AGAGGAAGTA CAGTGTCTGG ATTGGAGGCT 
    CCATTCTAGC ATCACTCAGT ACCTTCCAAC AGGTAAAATC ATCATTCGGT 
    TTTATATGGA ATTTTGTGTC CTTTTTTTTT GTT

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 3858979 [Map]; Strand: c
      • AT3G12110.1 - [+] show detail - actin-11
        Distance: 0; Region: exon4 (CDS)
    Flanking Genome Sequence: ET12717 - 5-prime edge 
    AGTGCTATGT AAGCAAGTTT CTCTTTCACA TCCCTTACGA TTTCACGCTC 
    TGCTGAGGTA GTGAATGAGT AACCACGCTC GGTTAAGATC TTCATGAGGT 
    AATCAGTCAG GTCACGGCCT GCAAGGTCCA AAC

AT3G12110.1

Model type
Protein coding
Short Description
actin-11
Curator Summary
Encodes an actin that is expressed predominantly during reproductive development.
Computational Description
actin-11 (ACT11); FUNCTIONS IN: structural constituent of cytoskeleton; INVOLVED IN: response to cyclopentenone, actin cytoskeleton organization; LOCATED IN: mitochondrion, cytoskeleton, plasma membrane; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Actin, conserved site (InterPro:IPR004001), Actin/actin-like (InterPro:IPR004000), Actin/actin-like conserved site (InterPro:IPR020902); BEST Arabidopsis thaliana protein match is: actin 3 (TAIR:AT3G53750.1); Has 15186 Blast hits to 14782 proteins in 3039 species: Archae - 6; Bacteria - 12; Metazoa - 5717; Fungi - 5233; Plants - 1598; Viruses - 2; Other Eukaryotes - 2618 (source: NCBI BLink).
Link
InterPro Scan - TAIR