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ET12723

CSHL Arabidopsis genetrap mutant lines

Original: ET12723

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET12723

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 17506396 [Map]; Strand: c
      • AT2G41930.1 - [+] show detail - Protein kinase superfamily protein
        Distance: 3712; Region: intergenic
      • AT2G41940.1 - [+] show detail - zinc finger protein 8
        Distance: -1113; Region: intergenic
    Flanking Genome Sequence: ET12723 - 3-prime edge 
    TTTACCGACC GTTACCGACC GTTTTCATCC TCATCGATTA AGGTTCAATC 
    TTTTAAATTG GTTAACTATC TGGTGATGAC ATGTCAACTA GTCGATTATG 
    AGCATCATTA ATGATCATGA ACATGGACCA CCTCTCTCTC TCTGTAAGAT 
    TATCTTTGCA TCAAAGAGAC AAAACATCCA AGAGACTAAA AGTATGGTCC 
    TTGAGAGAGA AGAAGTCTCT TTAATTAGGT CTTTCTATTT CTCTCTCTCT 
    CTATTAGTAG TAAAATCCAT GTACTTATAC GTAGACATAA TAACCAAATA 
    GGTCCGTGAT GTTAAAGAGT ACACACCTAA CTTCACCTTG CTAATGATCT 
    CTTACCTACA AACTCTCACT GTTTTT

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 17506317 [Map]; Strand: c
      • AT2G41930.1 - [+] show detail - Protein kinase superfamily protein
        Distance: 3633; Region: intergenic
      • AT2G41940.1 - [+] show detail - zinc finger protein 8
        Distance: -1192; Region: intergenic
    Flanking Genome Sequence: ET12723 - 5-prime edge 
    CCTACTTTCT CCCTGGATCA CATCATCTTA TCAATATGTA TGTAATCTGT 
    TAATACTTAT CAACTCGGAT CGATCATATA CACGTCTTCT TCAAATGAAC 
    TATATATATA TATGTATTCT CTTTTTGTTC GTCTACACTA AATTTTTTGA 
    TATTTTGTAA GAATAATTAA ATTTTAAATC CCATTAATTT TGATTATATA 
    TATTCCCTGA TTATGTCACA CAAATAATGT ATATGTTGCT AATGTCAAGC 
    TGGAATAAGG ACTATAAAAC TCATTAATCC ATAAATTAAT CTGACCTTTT 
    TC

AT2G41930.1

Model type
Protein coding
Short Description
Protein kinase superfamily protein
Computational Description
Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT2G42550.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G41940.1

Model type
Protein coding
Short Description
zinc finger protein 8
Curator Summary
Encodes a zinc finger protein containing only a single zinc finger.
Computational Description
zinc finger protein 8 (ZFP8); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: trichome differentiation, regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: C2H2 and C2HC zinc fingers superfamily protein (TAIR:AT3G58070.1); Has 1033 Blast hits to 1031 proteins in 54 species: Archae - 0; Bacteria - 9; Metazoa - 26; Fungi - 10; Plants - 958; Viruses - 0; Other Eukaryotes - 30 (source: NCBI BLink).
Link
InterPro Scan - TAIR