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ET12763

CSHL Arabidopsis genetrap mutant lines

Original: ET12763

Phenotypes

Morphological phenotypes

Original description

  • embryo lethal (unconfirmed)
Anatomical entity
/structure development stage		 Phenotypes
seed (PO:0009010)
  • present in fewer numbers in organism (PATO:0001997)

Original: ET12763

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 22587092 [Map]; Strand: c
      • AT5G55810.2 - [+] show detail - nicotinate/nicotinamide mononucleotide adenyltransferase
        Distance: -745; Region: promoter
      • AT5G55810.1 - [+] show detail - nicotinate/nicotinamide mononucleotide adenyltransferase
        Distance: -791; Region: promoter
      • AT5G55820.1 - [+] show detail - CONTAINS InterPro DOMAIN/s: Inner centromere protein, ARK-binding region (Int...
        Distance: 0; Region: intron2 (CDS)
    Flanking Genome Sequence: ET12763 - 5-prime edge 
    TCTTTCTCCC TGTATACACG CAATGTACGT TAATACTAGC CTTAACAAAA 
    TGCTCCTTAA CTTATCACAG AATAATCAAC ATCAAAGTGT GATTATGAAC 
    CCTAACCCCA TTTT

AT5G55810.1

Model type
Protein coding
Short Description
nicotinate/nicotinamide mononucleotide adenyltransferase
Curator Summary
encodes a bi-functional enzyme that expresses both nicotinamide-nucleotide adenylyltransferase (2.7.7.1) and nicotinate-nucleotide adenylyltransferase (2.7.7.18)activity.
Computational Description
nicotinate/nicotinamide mononucleotide adenyltransferase (NMNAT); CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Probable nicotinate-nucleotide adenylyltransferase (InterPro:IPR005248), Cytidylyltransferase (InterPro:IPR004820); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G55810.2

Model type
Protein coding
Short Description
nicotinate/nicotinamide mononucleotide adenyltransferase
Curator Summary
encodes a bi-functional enzyme that expresses both nicotinamide-nucleotide adenylyltransferase (2.7.7.1) and nicotinate-nucleotide adenylyltransferase (2.7.7.18)activity.
Computational Description
nicotinate/nicotinamide mononucleotide adenyltransferase (NMNAT); CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Probable nicotinate-nucleotide adenylyltransferase (InterPro:IPR005248), Cytidylyltransferase (InterPro:IPR004820).
Link
InterPro Scan - TAIR

AT5G55820.1

Model type
Protein coding
Computational Description
CONTAINS InterPro DOMAIN/s: Inner centromere protein, ARK-binding region (InterPro:IPR005635); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR