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ET12767

CSHL Arabidopsis genetrap mutant lines

Original: ET12767

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET12767

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 2580967 [Map]; Strand: w
      • AT1G08210.1 - [+] show detail - Eukaryotic aspartyl protease family protein
        Distance: -298; Region: promoter
    Flanking Genome Sequence: ET12767 - 3-prime edge
    CGGTAGAGGT TTTTACCGAC CGTTACCGAC CGTTTTCATC CCTAGCCGTT 
    GGTGTCGTAG ACTTCTGAGT TCTGGTGAAT TTTGGGTAAA TTGGTCAACG
    GAAATCAATG AATCACATCA GTACTTTCGG ACACGTCATA TGAATTACAT
    CAGTACTTTC AGACACATTA CATCAGTCTA TCTAGTACTC AACACCGAAC
    ATTTAAATAA ATAAAAATGA ACTTGTGAAA ATCATAATTA CCAAAAATGC
    CAAATTTAAA CACGCCATAA TGACTAACAC AAAAAAGGAT AGTTTATGCA
    AATCTTAATT CCACATTTAA TTAAACTAAT CACGAAAATG TGCAAAACTT
    TAGTACTGTC ATCAGAATAT ATTATCAGAA CGTTTCAATT GGCGGCTTTC
    TCTCTCTTTC CCCAGGAAGA GAAAGTTCGA ACTCCAGAAA TGGCGGTGGA
    TTCTCCCGCT GGAGTTATTA TCATCGCCGC CGTGCTTTTA CTTGCTGCGA
    CAACCTTGGC CTGCGGCTCC GACGCGGTTC TCAAGCTGGA GAGATTGATT
    CCGCCGAACC ATGAACTTGG TCTGACTGAG CTCAGGGCTT TT
  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 2581030 [Map]; Strand: w
      • AT1G08210.1 - [+] show detail - Eukaryotic aspartyl protease family protein
        Distance: -361; Region: promoter
      • AT1G08220.1 - [+] show detail - FUNCTIONS IN: molecular_function unknown; INVOLVED IN: mitochondrial proton-t...
        Distance: 0; Region: exon8 (3UTR)
    Flanking Genome Sequence: ET12767 - 5-prime edge
    TTTCTCCCTG CCACGGCTTT ATTTGGAACC TAAACTAAAC GGACATCCAC 
    GAGGTAGATA TTTGGCCTTG TTTTGTTTCC ACTTTTAACT CAAATTGTAT
    CAGAAAAAGA TTTAGGTCAT ATCATTCTCG GATGAGTACA ACTACACCTA
    TCCAAACAAG TGAAGAGTGA GTATGACCCC TTTCCGTTGA ACACCAGATA
    CAAAATTGGA CGAAAAGGAT TCTCTATCGC TTAAGTGCAG ATAATCCAAT
    CAAACTGCAA AACGGAAAGA TAAGAGATAC TTTATTATTG TCTTCGACAA
    CATCCTCCGT AAGAGCCAAG GAGGAGCACT TGTGTTTTGA GACGGTCTCC
    AGTTCAGGGA GCGATCTGGA TATGTAATGG AACCAAAAAG ACACTCAGAT
    GTTATATTTT CATACGCTAA ACTATATCAA GAAGGTGCTT CAAAGAAACT
    TTTGTAACTC TTAGCTATGA AACATTCAAG GCAAAGTTGA AATATTTTCT
    ACACAGAACG TTTTTCTGGC CATGCTGTAG AATTTTTCTG ATAATTGCAG
    GCCTAAGAAG AATTGGGAGT CTTGTGATTT AAATGGTTTA AGAG

AT1G08210.1

Model type
Protein coding
Short Description
Eukaryotic aspartyl protease family protein
Computational Description
Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: anchored to membrane, plant-type cell wall; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT5G22850.1); Has 5025 Blast hits to 5004 proteins in 412 species: Archae - 0; Bacteria - 0; Metazoa - 1724; Fungi - 965; Plants - 2068; Viruses - 0; Other Eukaryotes - 268 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G08220.1

Model type
Protein coding
Computational Description
FUNCTIONS IN: molecular_function unknown; INVOLVED IN: mitochondrial proton-transporting ATP synthase complex assembly; LOCATED IN: mitochondrial inner membrane; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: ATPase assembly factor ATP10, mitochondria (InterPro:IPR007849); Has 168 Blast hits to 168 proteins in 86 species: Archae - 6; Bacteria - 0; Metazoa - 2; Fungi - 107; Plants - 30; Viruses - 0; Other Eukaryotes - 23 (source: NCBI BLink).
Link
InterPro Scan - TAIR